Protein

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Genbank accession
CCI89107.1 [GenBank]
Protein name
phage tail fibers
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MKFRLVKLTAISSYSNENISFAVEYKKYFFSKWKQYYKTDWTSIDRPYSWKSDLEKCQKLLSTLKERGTTHIKTVIGK
Physico‐chemical
properties
protein length:78 AA
molecular weight: 9383,75960 Da
isoelectric point:9,77832
aromaticity:0,16667
hydropathy:-0,68974

Domains

Domains [InterPro]
IPR059658
STR
1–78
IPR059658
CCI89107.1
1 78
Architecture
STR
STR 1-78
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Yersinia phage phiD1
[NCBI] 		1206560 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Tequatrovirus
Host Yersinia pestis
[NCBI] 		632 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CCI89107.1 [NCBI]
Genbank nucleotide accession
HE956711.1 [NCBI]
CDS location
range 130161 -> 130397
strand -
CDS
ATGAAATTTCGTTTGGTAAAGCTCACAGCAATTAGTTCTTATTCTAATGAGAACATCTCATTTGCTGTAGAGTATAAGAAATATTTTTTCTCTAAATGGAAACAGTATTATAAAACTGATTGGACTAGTATTGATAGACCATATAGTTGGAAATCTGATTTAGAAAAATGCCAAAAATTACTTTCCACCCTTAAAGAACGTGGAACAACTCATATTAAAACTGTAATAGGTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
07738d3232f554406e8579f7877610607cc34854646787700a0a117ff8b44702
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8012
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic characterization of five bacteriophages specific for Yersinia species Skurnik,M., Nawaz,A., Happonen,L., Butcher,S. and Mattinen,L. 2012 — GenBank