Protein

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Genbank accession
YP_009879666.1 [GenBank]
Protein name
haemolysin-type calcium binding
RBP type
TSP
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MANKPTQPLFPLGLETSESSNIKGFNNSGTIEHSPGAILTFPEDTEVAGLPSSVRYNPDSDEFEGYYENGGWLSLGGGGIRWETLPHAPSSNLLEGRGYLINNTTGTSTVVLPSPTRIGDSVTICDAYGKFATYPLTVSPAGNNLYGSTEDMTISTDNVSATFTWSGPEQGWVITSGVGLGQGRVYSREIFTQILASETSAVTLNTPPTIVDVYADGKRLAESKYSLDGNVITFSPSLPASTELQVIEYTPIQLGNGGGSGSSTITWVYNGGSAIGGETEITLDIVVDDVPAIDINGSRQYKNLGFTFDPLTSKITLAQELDAEDEVVVIINGTPNIYNQIDYTLREVARVTNVKDTEVIYFSVGAVLSGYKVIYDKVTQRSYFIPELPTGTTAVSLSSSAVLVHSAGSVDLGALAVSREEYITLSGTFDSGAVINTKNELLTHTDGKYRWDGTLPKTVAPDSTPETSGGVGLGAWVGVGDATLRSDLSKDNGALLIDGGAITEFKKEFKFLSVGTVTNDRQAVKYTDGMWYIWGGTYPRDITVTTPATDTNWKCVGLLNGYPVNDARNFGFVSGMANALPALNAMIRSPFFKMFFPMGSTINIADKWAMRSFVDIDFNGSTIDWKGAILDSSNKATGYDLNVIHTNDYQGGTVGSYEHIYLRNFNIKGNDVGNGVNLRNVTHFKLENFTVDKSQRAGVNISNCHFGVVTGFHLTDCIARSDLGFTSTELEAWSDGMTTWYGSTEIEISNGLIEVPDTTRGGRCGYVVDGYAPPGNPTTHSIKITNLTVSGYDRPVHTEFSRNVTFENCRFSYLSTDKHQNLKCAVAVWNVYEPTVFINCYFYTQERFMLTEGALAKFYKCKIIKDIETSYMFFPGGGGQNGVIEFDSCEFSQRGGTWGMYNCTFKFYNSTLSSDTASLMDFGTETASRNLEFYSCGLTNIEISGNLAKSGSLIILDATNSGSNVNTGPNATLYVNNSNLFGEVTANTVMRYNGQLPKVLHYLQNVNQQYNGMWLGTGKPVGARPDGTGDWLRGDKIINLDATESNPYLWQCVTAGTPGRWSVAGSLGAGS
Physico‐chemical
properties
protein length:1071 AA
molecular weight: 115897,76760 Da
isoelectric point:4,79763
aromaticity:0,10551
hydropathy:-0,20009

Domains

Domains [InterPro]
DC_1946
ATT
1–852
DC_1946 DC_1661
G3DSA:3.30.2020.50
ATT
335–420
G3DSA:3.30.2020.50 G3DSA:2.10.10.80 IPR011050
IPR040775
RBD
416–481
IPR040775 IPR012334
YP_009879666.1
1 1071
Architecture
ATT
RBD
ATT 1-856 | RBD 1023-1066 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009879666.1
1 1071
Domain Start End Length (AA) Confidence
N-terminal 1 578 578 0,9978
Central domain 579 1001 424 0,9783
C-terminal 1002 1071 69 0,9370
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-578
Central
579-1001
C-terminal
1002-1071

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage Mutine
[NCBI] 		2054274 Uroviricota > Caudoviricetes > Pantevenvirales > Cvivirinae > Kuttervirus
Host Salmonella typhimurium
[NCBI] 		90371 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009879666.1 [NCBI]
Genbank nucleotide accession
NC_049428.1 [NCBI]
CDS location
range 30311 -> 33526
strand +
CDS
ATGGCCAACAAACCAACACAGCCTCTTTTCCCTTTGGGTTTAGAAACTTCTGAGTCTTCGAACATAAAAGGCTTCAATAACTCCGGCACCATAGAGCATTCCCCTGGTGCAATATTGACGTTCCCTGAAGATACTGAAGTTGCAGGTCTTCCATCTTCTGTACGTTACAATCCTGATAGCGATGAATTTGAAGGTTATTACGAAAACGGTGGTTGGTTGTCTTTGGGGGGCGGTGGAATACGCTGGGAAACGCTCCCTCACGCTCCCTCTAGCAATTTGTTAGAAGGTCGCGGCTATCTCATTAATAATACCACAGGGACATCTACAGTGGTTCTCCCTTCCCCTACGCGTATTGGGGATTCCGTTACTATTTGTGATGCTTATGGAAAATTCGCCACTTACCCATTGACTGTATCTCCAGCGGGAAATAACCTTTACGGCTCCACCGAAGATATGACGATATCCACCGATAACGTGTCGGCGACTTTCACTTGGTCTGGGCCTGAACAAGGTTGGGTTATCACATCTGGTGTTGGCCTCGGCCAAGGTCGTGTCTACAGTCGCGAGATTTTTACACAAATTTTGGCGTCTGAAACAAGCGCTGTCACTCTCAATACTCCACCAACAATCGTGGACGTGTATGCTGACGGAAAACGTCTTGCGGAATCCAAATATTCACTAGATGGGAATGTGATCACTTTCAGTCCTTCTTTGCCAGCCAGCACAGAACTTCAGGTGATTGAATATACTCCTATTCAATTGGGTAATGGCGGTGGTTCTGGTTCTTCTACGATTACCTGGGTCTATAATGGGGGGTCAGCGATTGGCGGTGAAACCGAAATCACGTTAGACATCGTTGTCGATGATGTTCCGGCTATTGATATAAACGGAAGTCGACAGTATAAAAATCTGGGGTTCACATTTGATCCATTAACCAGTAAAATCACTCTTGCGCAAGAACTGGATGCAGAGGATGAAGTTGTTGTAATTATCAATGGAACGCCAAACATCTATAATCAAATTGATTATACTTTGCGGGAAGTGGCTCGTGTAACCAATGTTAAAGATACAGAGGTCATTTATTTTAGTGTTGGTGCTGTGTTAAGTGGATATAAAGTTATCTATGATAAAGTAACACAGAGATCATATTTTATTCCAGAGCTACCGACTGGAACCACGGCAGTCAGCCTTAGTTCTTCGGCTGTGCTTGTACATTCTGCTGGTAGTGTTGATCTGGGCGCATTAGCTGTATCTCGTGAAGAATATATTACATTGTCTGGGACATTTGATTCTGGTGCTGTCATCAATACTAAAAATGAATTACTCACCCACACGGATGGAAAGTATCGTTGGGATGGTACACTTCCTAAAACCGTTGCTCCTGACTCAACTCCTGAAACATCTGGTGGCGTTGGCTTGGGTGCTTGGGTTGGTGTTGGTGATGCAACTCTGAGGAGTGATTTGTCTAAAGATAATGGTGCACTATTAATAGATGGTGGCGCTATTACAGAATTTAAGAAAGAGTTTAAGTTCTTAAGTGTCGGCACTGTTACTAATGATCGTCAAGCGGTTAAGTACACAGATGGTATGTGGTATATATGGGGTGGTACTTATCCACGGGATATAACAGTCACCACACCTGCTACTGATACCAACTGGAAATGTGTGGGATTACTGAATGGCTACCCAGTCAATGACGCCAGAAACTTTGGCTTCGTCAGCGGCATGGCTAATGCTCTGCCTGCACTAAATGCGATGATTCGTAGCCCATTCTTCAAGATGTTCTTCCCTATGGGTAGCACAATCAACATTGCTGATAAATGGGCTATGCGCTCATTTGTTGATATCGATTTCAATGGCTCAACTATCGATTGGAAAGGGGCAATTCTTGATAGCTCGAATAAAGCAACCGGGTATGATCTTAATGTAATACATACAAATGACTATCAAGGTGGCACTGTAGGAAGTTATGAACACATATATCTCCGTAATTTTAACATTAAAGGAAATGATGTGGGTAACGGAGTAAACTTACGAAATGTTACCCATTTCAAGTTAGAAAACTTTACTGTTGATAAATCACAACGCGCTGGGGTTAACATTAGCAACTGCCATTTTGGTGTTGTAACAGGATTTCATCTTACAGATTGCATTGCCCGCTCAGACCTCGGATTTACATCCACTGAACTTGAGGCATGGTCTGATGGTATGACAACCTGGTACGGAAGCACTGAAATAGAAATATCAAATGGCTTGATTGAGGTGCCAGATACTACCAGGGGTGGCAGATGTGGTTATGTAGTAGACGGATACGCCCCACCAGGAAACCCAACAACACACAGCATCAAGATTACAAATCTTACAGTATCAGGGTATGATAGGCCAGTTCACACTGAATTTAGTAGAAACGTTACATTTGAAAACTGCCGATTTAGTTATCTGTCCACGGATAAACATCAGAACCTAAAATGTGCAGTGGCAGTATGGAATGTGTATGAGCCAACAGTTTTTATAAACTGCTACTTCTACACCCAGGAACGATTCATGCTGACAGAAGGTGCACTTGCTAAATTTTACAAATGTAAGATTATAAAAGATATTGAAACAAGTTACATGTTCTTTCCTGGTGGTGGGGGGCAGAATGGTGTTATCGAATTTGATTCCTGTGAGTTCTCCCAAAGAGGTGGGACATGGGGCATGTATAATTGCACATTTAAATTCTACAACTCCACTTTATCATCTGATACTGCTAGTCTTATGGACTTTGGTACAGAAACAGCATCTAGGAACTTAGAGTTTTACTCATGTGGTTTAACTAACATCGAGATAAGCGGAAACCTAGCTAAATCTGGCTCGCTGATTATTCTTGATGCAACTAATTCGGGTAGTAATGTAAATACAGGACCCAATGCAACATTATACGTAAATAACAGCAATCTTTTTGGTGAGGTAACTGCAAACACTGTAATGCGGTACAACGGTCAACTTCCGAAAGTATTACACTATCTTCAGAATGTTAACCAGCAGTACAATGGAATGTGGCTTGGTACTGGTAAGCCTGTTGGCGCTAGACCTGACGGTACAGGAGATTGGTTGCGCGGTGATAAGATAATTAATCTTGATGCCACAGAATCAAACCCTTACCTATGGCAGTGCGTGACGGCTGGAACGCCTGGCAGATGGTCTGTTGCTGGTTCTTTAGGTGCAGGTTCTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
542440495cd47b8bd382170234901f1d983bb26fcd15e0d3a6f81d486f26431e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7180
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50