Protein
View in Explore- Genbank accession
- AWY10266.1 [GenBank]
- Protein name
- baseplate wedge protein
- RBP type
-
TSP
- Protein sequence
-
MKELVNIGQMVDDGTGDYLREGGIKINNNFTETYDELGDGKNLHPAGAWQTIEAHKLTNGTLNAVFGKSYAVDTGTSKATIKLPKGTPADYNKVIRIRDTFSTWQANAVTIEPASGDTLKGGGTRVFSTNLTDLELVYCRPNRWEYLPNKLLNKISNGDIATVMKKEYLCTEGQTDFLNIFDNNDYNLVNTHVYLRGNLLYYGKDFSDDSDYGSPGATAGALVPLDGKSIRLRTPAQKGDSLMVVTYLDGIAQFRSTYNRLDCTILDAKLTNEVTAPGARLVADLETLDSITVEQLGYVFNSNSGLINTNTLEVYVNGVILNMAGRAGLPMMYCEGADANNLTDCQLMGGNWVTSHNDYTITTNDNGAVTSIEFGRKFEHGDIVTIKWFNNDIGTTMEIDEITDVTDDMYIQRGPEYNISGAVRVTDYTNPVLPNVEPEAQKFVRVQVPGDMFDLLYPVGTIYENAINKSNPVTYMGFGVWTRWGEKRVLVGWTEDNQDTQFGLNNNDLDINGQPTHTAGGTGGNRTITITNDNMPSTVTDKEVLVADVDGPVVIGGCQFDPDDSGPAYYKYRQEKVTTNVTHIPPKPIETLDPYITVYRWMRIA
- Physico‐chemical
properties -
protein length: 605 AA molecular weight: 66820,88880 Da isoelectric point: 4,63928 aromaticity: 0,09091 hydropathy: -0,38777
Domains
Domains [InterPro]
IPR036240
STR
1–233
STR
1–233
IPR034695
Unmapped
1–605
Unmapped
1–605
DC_2238
STR
1–585
STR
1–585
IPR008987
ATT
2–147
ATT
2–147
G3DSA:1.20.5.960
Unmapped
13–43
Unmapped
13–43
1
605
Architecture
ATT 1-147 | STR 148-158 | ATT 159-261 | STR 262-451 | ATT 452-604 |
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
605
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 316 | 316 | 0,9381 |
| Central domain | 317 | 515 | 200 | 0,3325 |
| C-terminal | 516 | 605 | 89 | 0,9020 |
Note: Constraints were applied during segmentation.
Fixed 7 C-terminal predictions appearing before Central domain
Fixed 7 C-terminal predictions appearing before Central domain
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-316
1-316
Central
317-515
317-515
C-terminal
516-605
516-605
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Acinetobacter phage AM101 [NCBI] |
2178927 | Uroviricota > Caudoviricetes > Pantevenvirales > Twarogvirinae > Lazarusvirus |
| Host |
Acinetobacter baumannii [NCBI] |
470 | cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Moraxellales |
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
AWY10266.1
[NCBI]
Genbank nucleotide accession
MH165274
[NCBI]
CDS location
range 92569 -> 94386
strand +
strand +
CDS
ATGAAAGAATTAGTAAACATTGGACAAATGGTTGATGATGGCACAGGAGATTATCTTCGTGAAGGTGGCATCAAGATCAATAACAACTTTACCGAGACCTATGATGAATTAGGCGATGGAAAGAATTTGCATCCTGCTGGTGCTTGGCAGACTATTGAAGCACATAAACTCACAAATGGCACACTGAATGCTGTATTCGGGAAGTCATATGCAGTTGATACGGGAACATCTAAAGCAACAATAAAATTACCTAAAGGCACTCCAGCCGATTACAATAAAGTTATTAGAATTCGAGATACATTTTCTACCTGGCAGGCCAATGCAGTTACAATTGAGCCTGCTAGTGGAGACACATTAAAAGGTGGTGGAACACGTGTCTTTAGTACAAACCTTACTGACTTAGAATTAGTTTATTGTCGTCCTAATCGCTGGGAATATCTACCAAACAAATTACTTAATAAAATTTCAAATGGCGATATTGCTACAGTAATGAAAAAGGAATATTTGTGTACTGAAGGGCAAACAGATTTTCTTAATATTTTTGACAATAATGACTATAACTTAGTCAACACACATGTCTATTTACGTGGCAACTTGCTTTATTACGGCAAAGATTTTTCTGATGATTCCGATTATGGTAGCCCTGGAGCAACGGCTGGCGCACTAGTTCCATTAGATGGCAAAAGTATCAGATTACGTACACCTGCTCAAAAGGGCGATTCATTAATGGTAGTAACTTATCTAGATGGCATCGCACAATTCAGATCAACGTATAACCGTTTGGATTGTACTATTCTTGATGCTAAATTAACCAATGAAGTTACCGCACCAGGTGCACGTTTAGTTGCAGATCTTGAAACATTGGATTCAATAACTGTTGAACAGCTCGGATACGTCTTCAATAGCAATAGTGGTTTAATTAATACCAATACACTGGAAGTGTATGTCAATGGTGTTATTTTGAATATGGCAGGGCGTGCAGGCTTACCGATGATGTATTGTGAAGGCGCTGATGCCAATAATTTGACTGATTGTCAATTAATGGGTGGTAATTGGGTTACTTCACACAATGACTACACAATTACTACAAATGATAACGGAGCGGTAACAAGCATAGAATTTGGACGAAAATTTGAACATGGTGACATCGTAACTATTAAATGGTTCAACAATGACATTGGCACAACAATGGAAATTGATGAAATCACAGATGTAACAGATGACATGTATATCCAACGTGGTCCTGAATACAATATTTCAGGTGCAGTTCGTGTAACAGATTATACAAACCCAGTTTTGCCGAATGTAGAACCAGAAGCTCAGAAATTTGTACGTGTACAGGTGCCGGGCGACATGTTTGATTTGCTATATCCTGTTGGCACCATCTATGAAAATGCTATCAACAAATCTAATCCTGTAACATATATGGGCTTTGGTGTTTGGACAAGATGGGGCGAAAAACGAGTACTTGTTGGCTGGACTGAAGACAACCAAGATACACAGTTTGGTTTAAATAATAATGACCTTGACATTAATGGACAGCCAACACATACTGCAGGTGGTACAGGCGGAAATCGAACAATTACTATTACAAATGATAATATGCCGTCAACAGTTACTGATAAAGAGGTTCTTGTTGCTGATGTAGATGGGCCTGTTGTAATTGGCGGATGTCAATTTGATCCTGATGATTCCGGGCCGGCATATTATAAATATCGCCAAGAAAAAGTTACAACTAATGTTACTCATATTCCACCTAAACCTATTGAAACACTAGATCCATACATCACAGTGTATCGTTGGATGAGGATTGCATAA
Genome Context
Genome Context
Tertiary structure
PDB ID
16ba21fcb983f8a227de3922cba85e536740430a4ec26543a05563bc31f60c4b
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50