Protein

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Genbank accession
AUR84592.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MPQFNLMKGSKTTASARYLDSLPVNMVPTPHETQASSGYLRSFPGITHHYDCDGLSYGAEYNDLTQTEYRILGSQLFANGKNAADIAGGKLTSVCHSANSTAFVDNGKLKYFRDDKVTELKNWYEGENYVAYPDYKFTPDFNGSGYITIPAWKNEGGFVVNVEINFKSLPSTDVFIVGAKTKYDGDTKGERFVGMFYKASDKKVYYRPNNDLDPSSPDVDSWSDNDVFVGDAVVGDNFFYAVSDTKFEFNIEYIGAVSINGTVKNKFNNGQIESLTLYDTLDGSIFRSYEMVKSVERDSDDKPSAPTTKSITNTEDETGATNGRMVSLSWAGFHTQADPVKSPATDFDLDGVIDADRHEGRYVWINDRKFGCTALTIGESGDEDTSPEQRPDYIAPFYSPESDPDDNKAIKSWQGKYVAVFGRNTTQWFGLTGNSEQIYAPQKSMQTAAGIVSTHAVCRYKDSFAAVGSIKGGTLQVMVIGPGSHQKISTTTIDSMINKYKESELQSVLVETVMMNNHDFLFIHLPKETLVFDGNQNAWFMMKSDIIGDKPYTGRHIIYNQEEGLTIGDSVANRVGKLDDSVSSQYGELTEFLLYTPLVRVNNKRGKTPLFDLQFDSVYGHVNSFQSIFISQTLDGAMYGNEYRLRYNDPLEFNNKPMISSLGAVNDSIGYKLRVVSKDPVNLSGFSVRIGYVG
Physico‐chemical
properties
protein length:694 AA
molecular weight: 77151,87630 Da
isoelectric point:5,02527
aromaticity:0,11816
hydropathy:-0,46153

Domains

Domains [InterPro]
IPR021098
STR
3–132
IPR021098 IPR021098
IPR021098
STR
3–120
IPR021098 DC_0866 IPR021098
AUR84592.1
1 694
Architecture
STR
STR 3-690 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR84592.1
1 694
Domain Start End Length (AA) Confidence
N-terminal 1 80 80 0,8489
Central domain 81 402 323 0,7977
C-terminal 403 694 291 0,4280
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-80
Central
81-402
C-terminal
403-694

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.061.O._10N.286.55.C2
[NCBI] 		1881307 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio lentus
[NCBI] 		136468 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR84592.1 [NCBI]
Genbank nucleotide accession
MG592439 [NCBI]
CDS location
range 8876 -> 10960
strand +
CDS
ATGCCGCAATTCAATTTAATGAAAGGTTCCAAGACTACCGCTAGCGCTAGGTATCTAGATTCGCTACCGGTCAACATGGTTCCAACACCACACGAAACCCAAGCCTCATCTGGGTATCTTCGATCATTCCCGGGCATTACTCATCACTACGATTGTGACGGGCTAAGCTATGGCGCTGAGTACAACGACCTAACCCAAACCGAATACCGAATCCTTGGCTCGCAACTGTTCGCTAATGGTAAAAATGCTGCTGATATCGCCGGCGGTAAGTTAACCAGCGTTTGCCACTCTGCCAATTCAACTGCGTTCGTTGATAATGGGAAGTTGAAGTATTTCCGTGACGACAAAGTAACCGAGCTAAAAAACTGGTATGAGGGCGAGAATTACGTCGCATACCCTGACTACAAGTTCACCCCTGACTTTAACGGTTCAGGTTATATCACCATTCCAGCGTGGAAGAATGAAGGAGGATTTGTTGTTAACGTAGAGATTAACTTTAAATCACTTCCATCTACTGACGTATTTATTGTTGGAGCAAAGACTAAGTACGACGGCGACACGAAAGGCGAAAGGTTTGTCGGGATGTTCTACAAAGCATCTGACAAGAAGGTTTACTACCGACCTAATAACGACCTAGACCCATCAAGCCCGGACGTTGACTCTTGGAGTGATAATGACGTATTTGTTGGAGATGCGGTTGTAGGTGATAACTTTTTCTATGCGGTGTCCGACACTAAGTTTGAATTCAATATTGAGTACATTGGCGCGGTTAGCATTAATGGAACCGTAAAGAATAAATTCAACAACGGCCAAATAGAAAGCTTAACCCTGTACGACACGCTTGATGGTTCTATATTTAGATCTTACGAGATGGTTAAAAGTGTCGAGCGTGATAGCGATGACAAGCCGAGCGCACCAACCACAAAGTCAATCACAAACACTGAAGATGAAACTGGAGCGACTAATGGTCGAATGGTTAGCCTTTCTTGGGCTGGATTCCACACCCAAGCAGACCCAGTTAAGAGCCCAGCAACAGATTTTGATTTGGATGGCGTAATTGACGCTGACCGCCATGAGGGTAGATATGTTTGGATTAATGACCGTAAATTTGGTTGTACCGCACTAACTATTGGTGAGTCTGGCGATGAAGATACAAGCCCAGAGCAGCGACCTGATTACATTGCGCCCTTCTATAGCCCAGAGTCAGACCCAGACGACAACAAGGCTATCAAGTCATGGCAAGGTAAGTACGTTGCGGTATTTGGCCGTAACACCACCCAGTGGTTTGGATTAACTGGCAATTCCGAGCAGATTTACGCGCCTCAGAAGTCCATGCAGACAGCAGCAGGAATTGTAAGTACTCACGCGGTTTGTCGGTACAAAGATAGCTTTGCAGCGGTTGGTAGTATTAAAGGTGGGACGCTTCAGGTTATGGTAATCGGCCCAGGTAGCCATCAGAAGATATCAACCACAACCATCGATTCTATGATCAACAAATACAAAGAGTCGGAGCTGCAAAGCGTATTAGTTGAAACGGTGATGATGAACAACCACGACTTCCTGTTTATTCACTTACCTAAAGAGACTCTAGTTTTTGATGGAAATCAAAACGCATGGTTCATGATGAAGTCAGACATAATTGGAGATAAGCCGTACACAGGTCGCCACATTATTTACAACCAAGAAGAAGGCCTAACAATAGGTGACAGCGTAGCGAATAGAGTTGGCAAGTTAGACGATTCAGTGTCTAGCCAGTATGGTGAGTTAACAGAGTTCTTGCTCTACACGCCACTTGTTCGAGTTAATAATAAGCGAGGTAAGACGCCACTGTTCGACCTTCAGTTCGATTCTGTTTACGGTCACGTTAACTCGTTTCAGTCTATCTTTATTAGTCAGACTTTAGACGGTGCAATGTATGGTAATGAGTACCGCTTGAGATACAACGACCCGCTAGAGTTCAATAACAAGCCTATGATTAGCAGCCTAGGCGCGGTTAATGACTCAATAGGATATAAGCTTAGGGTTGTATCAAAAGACCCAGTAAACCTTTCAGGATTCAGTGTGAGGATTGGATATGTCGGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
cfdd1a52bdd58e3c9819771a93df37d705852aeb1777bf840697e798adc5fd32
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6356
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank