Protein

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Genbank accession
YP_007674083.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSSLFDVTAGSLIGPTTGGTVTQATNKGTGVTLNTQSGQITMNNAALADAAEVSFTVTNSKIAATDVVVACHGSAGTAGAYIVSANGIAAGSFKITVSNVSGGSLSEAIVINFVALKGASS
Physico‐chemical
properties
protein length:121 AA
molecular weight: 11684,93790 Da
isoelectric point:5,49789
aromaticity:0,04132
hydropathy:0,48678

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Prochlorococcus phage MED4-184
[NCBI] 		889955 No lineage information
Host Prochlorococcus
[NCBI] 		1218 Bacteria > Cyanobacteria > Prochlorales > Prochlorococcaceae >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_007674083.1 [NCBI]
Genbank nucleotide accession
NC_020847.1 [NCBI]
CDS location
range 26531 -> 26896
strand +
CDS
ATGTCTTCATTATTTGACGTAACAGCTGGATCACTTATTGGTCCAACTACAGGCGGCACTGTAACTCAGGCTACTAACAAAGGAACTGGTGTAACTCTGAATACTCAGAGTGGACAAATCACAATGAATAATGCTGCATTAGCAGATGCCGCTGAAGTATCTTTTACAGTTACTAACAGCAAAATTGCTGCTACAGATGTTGTCGTTGCTTGTCATGGTTCCGCTGGAACTGCAGGCGCTTACATTGTAAGTGCTAATGGCATTGCTGCTGGATCATTCAAGATCACAGTTTCTAATGTTTCTGGTGGTTCACTAAGTGAAGCTATTGTTATTAACTTTGTTGCTCTCAAGGGTGCATCAAGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6fcc4dfda2ccfe573da8efcfc030c399749837e5c792e386935ca95ce6dfdf63
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8063
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Cyanophage MED4-184 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank