Protein

View in Explore
Genbank accession
YAO58200.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MTVKYYAILTNQGAARLANATMLGSKLNLTQMAVGDANGVLPTPDPAQTKLINQKRIAPLNLLSVDPNNQSQIIAEQIIPENEGGFWIREIGLYDDEGVLIAVANCPETYKPQLQEGSGRTQTIRMILVVTNTEAITLKIDPSVVLATRKYVDDEVLELKLYVDDQMRNHIAAQDPHTQYAQKHNPTFTGEPKAPTPAAGNNTTRIATTEFVQAAVTALINGAPATLDTLKEIAAAINNDPKFSTTINNVLSGKQPLDETLTHLSGKDVAGLLAYLGLEETINRAADALQKSQNGADIPDKPRFVQNIGLKETLNPTKRVSIGNIGTGVFDGSTPCINIGDSDSGFIGSADGVLDIYCNAAKVGYIDGNGLHMLTDIHFDNARMTTNGDIFGSVWGNNWLSIWITNQLNTRGTIDWINSELAVRDNNINTRATWDYVNQTFARKNTGSIQDWGWILDDSTGFIMQWGTLGNSNGTYNFPRAFPVGCFAVFVTNTNAQGTQVDNAFGYPVSNSQFFAATKSSGMANLVNNFPVAWLALGR
Physico‐chemical
properties
protein length:539 AA
molecular weight: 58432,95520 Da
isoelectric point:4,98992
aromaticity:0,07792
hydropathy:-0,21243

Domains

Domains [InterPro]
IPR051934
Unmapped
1–373
IPR051934 G3DSA:6.20.70.20 G3DSA:2.60.40.3940
IPR022225
ATT
1–150
IPR022225 IPR054075
DC_1172
STR
1–536
DC_1172
YAO58200.1
1 539
Architecture
ATT
STR
ATT 1-150 | STR 151-539
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SMP2416
[NCBI] 		3458392 Viruses > unclassified bacterial viruses >
Host Salmonella sp.
[NCBI] 		599 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YAO58200.1 [NCBI]
Genbank nucleotide accession
PX068453.1 [NCBI]
CDS location
range 11929 -> 13548
strand +
CDS
ATGACAGTGAAATACTACGCCATTCTGACTAATCAGGGCGCGGCACGGCTGGCTAACGCGACGATGCTCGGCAGTAAGCTGAATCTGACGCAAATGGCCGTTGGTGATGCAAATGGTGTCTTGCCGACACCAGACCCGGCACAGACAAAACTTATTAACCAGAAACGCATCGCGCCGCTGAATCTTCTGAGTGTTGACCCGAACAACCAGAGCCAGATTATTGCGGAGCAAATCATCCCTGAGAACGAGGGCGGATTCTGGATCCGTGAGATTGGGCTTTATGATGATGAAGGCGTACTCATTGCGGTGGCGAACTGCCCGGAAACGTACAAACCGCAGTTGCAGGAAGGCAGTGGTCGTACCCAGACTATCCGCATGATTCTGGTTGTCACGAATACCGAAGCTATCACGCTGAAAATCGACCCGTCGGTGGTACTGGCGACCCGTAAATACGTGGATGATGAAGTCCTGGAATTAAAGCTGTATGTGGATGACCAGATGAGAAACCACATTGCCGCACAGGACCCTCATACCCAGTATGCGCAGAAACATAATCCGACATTTACCGGAGAACCAAAAGCGCCGACGCCTGCCGCAGGAAATAACACCACGCGGATTGCGACCACTGAGTTTGTTCAGGCCGCTGTTACCGCTCTGATTAACGGTGCGCCTGCCACGCTGGACACACTAAAAGAAATTGCTGCAGCCATTAACAATGACCCGAAATTCAGCACCACCATTAACAATGTGCTGTCAGGTAAGCAGCCACTGGATGAGACGCTGACTCATTTGAGTGGAAAGGATGTTGCCGGTCTTCTCGCATACCTTGGTTTAGAAGAAACGATAAATCGTGCCGCCGATGCGTTACAAAAATCACAGAACGGTGCAGACATTCCTGACAAGCCGCGGTTTGTACAAAATATCGGTTTAAAAGAAACCCTCAATCCAACAAAACGCGTGAGTATCGGCAATATCGGAACCGGCGTTTTTGACGGCAGCACACCGTGTATAAATATCGGTGACAGTGACAGTGGATTTATCGGCAGCGCGGATGGCGTACTGGATATTTACTGTAACGCTGCCAAAGTGGGTTATATCGATGGCAACGGATTACACATGCTCACCGATATTCATTTCGATAATGCGCGCATGACCACTAATGGTGACATTTTTGGTTCAGTGTGGGGGAATAACTGGCTGAGTATCTGGATTACTAATCAGCTAAATACCCGTGGAACGATTGACTGGATCAATAGTGAACTGGCAGTTCGTGACAACAACATCAACACCCGCGCCACATGGGATTATGTTAACCAGACTTTCGCCCGTAAAAATACCGGCAGCATTCAGGACTGGGGCTGGATTCTGGACGACAGCACCGGATTTATAATGCAGTGGGGAACACTTGGTAACTCAAACGGAACCTACAATTTCCCGCGCGCTTTCCCTGTTGGTTGCTTTGCCGTTTTTGTAACCAATACCAACGCTCAGGGCACCCAGGTGGATAACGCATTCGGATACCCGGTGAGCAACAGTCAGTTTTTTGCCGCCACCAAGTCATCAGGAATGGCCAATCTGGTCAATAATTTTCCTGTAGCCTGGCTTGCACTTGGGAGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
29d1f39a20e167ae559e3e8611c379a90e15150b46fa50ce2a67e507460be0d9
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8403
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50