Protein

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Genbank accession
WKV23592.1 [GenBank]
Protein name
long-tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,53
TF
Evidence RBPdetect2
Probability 0,84
Protein sequence
MATIKQIQFKRTKVAGSRPTAAQLAEGELAINLKDRTIFTKDDLNQIIDLGFAKGGEVSGDITQIGNYTQTGNYNLTGDATISGKTTTSTLDVGSVSDLRQTNFRPVLSTTTGSNFIISNSGGLIKPITLTVEGTATSSNTILRHSVDTTVAASGFIDSINVYLNPTDGALVTALNGTVNISSSLKTPKLSVSGAETALGDHSISIGDNDTGFKWNSDGVFSLVTDSNSIYTYSRDRTYSNRPTNFRYTSDFDATTPALAPPGTWLASVETAIDGNAYGDGMSYLGYKDAAGYSFYFRGGGTFNVASKGGFNVDTAAAFAKTVDVSDILTCSSIIKAKGPGQVDVTSAGNIALGGTIQWVPSYMSGSPNRARDTIATAAWGDADQRINVLETSDPHGWWYYIQRAGSGSSSPTGIEGRVNGSWQASDLISDNTLRVAGAFTCTRRNNASWGDNAGWYAGATPVVANQGNIQEMDPGVGGFYPGFAQCNYNGTGWNQAFVLGLLGQGVQRWRRGVLALRGDGPVDAGQQIARWYFSQEDGSLESEGPLKAPSVQAGQITSFGVNVTNALGSASITIGDNDTGLLWGGDGVIKLMANNAHVATWDSATFYTMGGKNIISNGDIRQDGGGSIYCRDLNVSSDRRIKKDIKAFENPVDILSALGGYTYLIEKGFNEDGSQAYEESAGLIAQEVEAVLPRLVKISNDGTKDVKRLNYNGITALNTAAINVHTKEINELKKQLKELKDIVKFLTK
Physico‐chemical
properties
protein length:749 AA
molecular weight: 79516,24170 Da
isoelectric point:5,26803
aromaticity:0,08545
hydropathy:-0,26101

Domains

Domains [InterPro]
DC_0000
STR
1–749
DC_0000
IPR030392
CHP
638–737
IPR030392
IPR030392
CHP
638–698
IPR030392 Coil
WKV23592.1
1 749
Architecture
STR
STR 1-749
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SEA1
[NCBI] 		3061287 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella typhimurium
[NCBI] 		90371 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WKV23592.1 [NCBI]
Genbank nucleotide accession
OQ927978.1 [NCBI]
CDS location
range 151302 -> 153551
strand +
CDS
ATGGCTACTATAAAACAAATACAATTTAAAAGAACTAAAGTAGCAGGCTCTCGTCCTACTGCCGCTCAACTCGCTGAAGGCGAACTTGCTATTAACTTAAAAGACCGCACTATTTTTACAAAAGATGATTTGAACCAAATTATCGATTTAGGTTTTGCTAAAGGCGGCGAAGTATCAGGAGATATCACGCAGATTGGTAATTATACCCAAACTGGGAACTATAATTTAACCGGCGATGCTACTATATCAGGCAAAACTACTACAAGCACACTGGATGTTGGGTCTGTTTCAGATCTAAGACAGACAAACTTTAGACCAGTATTAAGCACAACAACTGGTTCTAATTTTATTATATCAAACTCTGGCGGCTTGATTAAACCAATTACTTTGACGGTAGAAGGCACAGCTACAAGTTCAAACACTATTCTGCGCCATTCAGTTGATACTACTGTAGCAGCTTCTGGATTTATCGATTCAATTAATGTTTATTTAAATCCGACGGACGGCGCTCTTGTTACAGCTCTCAATGGTACTGTGAATATCAGTAGTTCCCTTAAAACTCCTAAACTTTCAGTTTCTGGCGCGGAAACTGCTTTGGGAGATCATAGTATTTCAATCGGTGATAATGATACAGGATTTAAATGGAATTCTGATGGTGTATTCAGCTTAGTTACTGACAGTAATTCAATTTATACATACTCTCGTGATAGGACATATTCTAACCGTCCAACAAATTTCCGGTATACGTCTGACTTTGATGCTACGACACCTGCTTTAGCTCCGCCAGGCACATGGTTAGCTTCAGTTGAAACTGCAATAGACGGTAACGCTTACGGCGATGGAATGAGCTATCTCGGTTATAAAGATGCCGCAGGTTATAGTTTTTATTTCCGCGGCGGCGGCACTTTTAACGTAGCTTCTAAAGGTGGATTTAATGTAGACACAGCTGCGGCTTTTGCCAAAACGGTTGATGTATCTGATATTCTAACATGCAGCTCTATTATTAAAGCTAAAGGCCCAGGTCAAGTTGATGTTACTAGTGCTGGTAATATCGCACTTGGTGGAACTATTCAATGGGTGCCTTCGTATATGAGCGGAAGCCCAAATAGAGCACGAGATACAATAGCTACAGCAGCTTGGGGCGATGCCGACCAACGAATTAACGTATTAGAAACATCTGACCCGCATGGTTGGTGGTATTATATACAACGTGCCGGTTCTGGAAGTTCTTCTCCTACGGGAATAGAAGGACGAGTCAACGGCTCTTGGCAAGCATCTGATTTAATTTCTGATAATACTCTAAGAGTAGCCGGAGCTTTCACTTGTACTAGAAGAAACAACGCATCATGGGGTGATAACGCTGGATGGTATGCTGGAGCAACACCAGTCGTAGCTAACCAAGGAAACATTCAAGAAATGGACCCCGGTGTAGGCGGTTTTTATCCTGGATTTGCTCAATGTAACTATAATGGCACTGGATGGAACCAAGCATTTGTTCTGGGGTTACTAGGCCAAGGTGTTCAGAGATGGCGTCGTGGTGTATTAGCTCTTAGAGGCGATGGTCCTGTTGATGCTGGGCAACAAATTGCTCGTTGGTATTTTAGTCAAGAAGACGGAAGTTTGGAATCAGAAGGTCCGCTTAAAGCTCCTAGTGTTCAAGCTGGACAAATAACATCTTTTGGTGTAAACGTTACAAACGCGTTAGGTAGTGCGTCTATAACCATTGGCGATAACGATACTGGATTGCTTTGGGGCGGCGATGGTGTAATAAAACTTATGGCAAACAACGCTCATGTTGCAACATGGGATTCGGCCACATTTTACACAATGGGTGGAAAAAATATAATATCCAATGGAGATATTAGACAAGATGGCGGCGGGTCGATTTATTGTAGAGACCTTAATGTTAGTTCTGACAGAAGAATTAAGAAAGACATAAAAGCCTTTGAAAATCCCGTAGATATTTTAAGCGCGTTAGGTGGTTATACTTATCTTATTGAAAAAGGATTTAATGAAGATGGAAGTCAGGCTTACGAAGAGTCCGCTGGATTAATTGCCCAAGAAGTAGAAGCTGTTCTTCCTCGTTTAGTTAAAATATCCAATGATGGAACAAAAGATGTTAAAAGACTTAATTATAACGGTATAACAGCTTTAAATACTGCTGCTATAAATGTACATACTAAAGAAATTAATGAGCTCAAAAAGCAATTAAAAGAGCTTAAAGACATTGTTAAGTTTTTAACTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
af3a84a83607566dbbc1572d5b8d0b8e3c30d152717bed9078d3489265facca7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5448
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation, identification and characterization of lytic, wide host range bacteriophages from waste effluents against Salmonella enterica serovars Akhtar,M., Viazis,S. and Diez-Gonzalez,F. 2014 — GenBank
Accurate and sensitive detection of Salmonella in foods by engineered bacteriophages Nguyen,M.M., Gil,J., Brown,M., Cesar Tondo,E., Soraya Martins de Aquino,N., Eisenberg,M. and Erickson,S. 2020 — GenBank