Protein

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UniProt accession
A0A8S5RTD9 [UniProt]
Protein name
Tail collar domain protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,80
Protein sequence
MKDRQPTQVLANGAIRYGIYSADGTLDHYEYMKREDAPTVEGTPLNKANLLSDATENKIWNNKDKPADPTVNDALYELSKGTARIGDISMTARGDRSASWILCDGRAISNVEYPDLYNVLRTDVDAGDWDEIEVTGMIGTHPSLSYVNGHWFCVAQKSDKSLNIAVSSDLSSFDIRSMSVETTWNNSLGSYSLLNILGTTPVHYYAGKYLFAAFYLCSRGNGYGYATFIVYSDTPAGTWGLSPVQVDTGYDRTKEHYISDLLIYDGIYYIPKPRQDGTSNNSTYYWATDIQGQWTKMPTASGFTERNTQAKNYGAIYSEAGNYNVYKFQGLNDGYVASSTYPGGITGSAINLAAAGDTVILICKNGAAYSLDGGETFTSAATFGSEFPTKLTHNIAIYDGNICATFLKNGTEKFIAVTSAPDFAFAIKPVDYEIGWFANNGNTVSAIVDNSEDVQVKLLTRDFSYSAKRIPKITPDGRSYAYIKALEE
Physico‐chemical
properties
protein length:488 AA
molecular weight: 53564,79610 Da
isoelectric point:4,92006
aromaticity:0,12295
hydropathy:-0,33914

Domains

Domains [InterPro]
DC_1682
ATT
1–170
DC_1682
IPR037053
ATT
77–132
IPR037053
A0A8S5RTD9
1 488
Architecture
ATT
ATT 1-170 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A8S5RTD9
1 488
Domain Start End Length (AA) Confidence
N-terminal 1 105 105 0,9405
Central domain 106 304 200 0,7298
C-terminal 305 488 183 0,1643
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-105
Central
106-304
C-terminal
305-488

Taxonomy

  Name Taxonomy ID Lineage
Phage Siphoviridae sp. ctfHp48
[NCBI] 		2827583 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAE92627.1 [NCBI]
Genbank nucleotide accession
BK057805 [NCBI]
CDS location
range 1310 -> 2776
strand -
CDS
ATGAAAGACAGACAACCGACACAGGTGCTGGCCAACGGCGCGATCCGATACGGCATTTACAGCGCCGACGGCACACTTGACCACTACGAATACATGAAGCGCGAGGACGCTCCAACCGTGGAGGGTACGCCGCTCAATAAGGCAAATCTTTTATCCGACGCGACGGAGAATAAGATCTGGAACAACAAGGATAAACCGGCTGATCCGACCGTCAACGATGCGCTGTACGAGTTATCTAAAGGCACGGCGCGTATCGGCGACATCTCCATGACTGCCCGCGGGGATCGCTCGGCTTCGTGGATCCTCTGCGATGGACGGGCAATTTCAAACGTCGAGTACCCGGATCTGTACAACGTCCTGCGCACGGACGTCGATGCGGGTGATTGGGATGAAATCGAAGTTACGGGCATGATTGGCACGCATCCTTCCTTGTCGTATGTAAACGGGCACTGGTTCTGCGTTGCGCAAAAAAGCGACAAAAGCCTAAACATTGCAGTTTCAAGCGATCTCTCCTCGTTCGATATAAGGTCCATGTCCGTTGAGACGACATGGAATAATTCGCTTGGCTCTTATTCCTTGCTCAACATTCTCGGCACAACACCCGTACATTATTATGCCGGTAAGTATCTGTTTGCTGCTTTTTATCTATGCTCAAGAGGCAACGGCTACGGATATGCGACGTTTATCGTATACTCGGACACACCGGCAGGAACGTGGGGCCTTTCTCCAGTCCAAGTAGATACAGGATATGACAGGACGAAAGAGCACTATATCTCCGATCTGCTCATCTACGATGGGATTTACTACATACCGAAACCGCGCCAAGATGGGACCTCAAACAACAGCACTTATTATTGGGCAACGGATATTCAAGGCCAGTGGACGAAGATGCCGACCGCCTCTGGCTTCACGGAAAGAAACACACAGGCAAAAAACTATGGAGCTATTTACTCGGAGGCGGGCAACTATAATGTTTATAAATTCCAGGGGCTAAACGACGGGTATGTAGCAAGCTCTACCTATCCGGGCGGAATAACTGGCTCTGCGATAAATCTTGCAGCAGCCGGGGACACAGTTATTTTAATCTGCAAAAATGGTGCTGCGTATTCGTTGGATGGCGGAGAGACTTTTACTTCGGCAGCTACATTTGGGAGCGAATTTCCGACGAAACTAACGCACAATATAGCCATTTACGATGGAAATATCTGTGCCACTTTTCTAAAAAACGGAACAGAAAAATTTATTGCAGTAACAAGTGCCCCTGATTTTGCGTTCGCGATCAAGCCGGTTGACTATGAAATCGGCTGGTTCGCGAATAATGGCAATACAGTTTCCGCAATTGTTGATAACTCCGAGGATGTACAAGTTAAACTCCTCACAAGAGATTTTTCGTACTCTGCAAAGCGGATCCCCAAAATCACCCCCGATGGCCGCAGTTATGCTTACATCAAAGCGCTGGAGGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
811c788a258029b906b3c2ddcf371c80ee11cd4f3709e0f027cfd3210024b27a
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8663
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50