Protein

View in Explore
Genbank accession
XCH42194.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,88
Protein sequence
MALKTKIIVQQILNIDDITTTASKYPKYTVVLGTSISSITASELTAAVEASAASAAAAKDSEIAAKESETNAKDSENLSANYANSSEASATQSATSATEAERQAGLSKDSADASATSAEESKGFRDSAELAAQDAEQSRLLAEQAKKDAEAAKTAAATSEQNAAVSATESTNQATAATGSATKAGEYATTAKDSEIAAKTSELNAKDSEHESAISAEASEASASQSAISATQSAASATKSAESSAAAKTSETNAKTSETNAKTSETNAKTSETNAKTSETNAAAYAAAAKTSETNAAASAASASDSKGFRDEAEAFAAQASTSALAAKNSEINTKTSEINSKASEDAAKLAQQGALGSANTATQAMTTTKGYRDEAEGFKNTATTAATTATDKALEAAGSATMAGEKAIAATNAADRAEIAAASAEQVTQASLKKDQNLKDLTDKVAARKELQIQAVVSKDSNNVGDYNSFTSPNVVYELRLANDGGWRVARNSDNATSALPIGAGGTGAENVDGAKINFGIDRLKQTETETMMYAPGINSPYRITIRPDAAWGVWTDETGRWIPLSIDAGGTGSNTEVGARKNLNTPVGGQAITIPDNSNILGFMSTYAESGYYSSGELVTYQPPEASGWWMYELHVHRKNANGHVEYGNIVATTMNGNKWGIICTNGSWGGWYRIARSDRQLMLLSPDAQSALGDYSIAIGDHDSGLKWDSDGHISAFADSARIFAWTPSGINTYGTISSYVGDNIRGMYVNGTRRGDPNALIAGPVEGGAFSAWRSRASGLLVEHNSFDSAVNVFKSVYWGKDWISGMDSVKWSSGSAEVHLYVGGTEYIFDAAGNGSASNWVSRSDIRLKAHLKEIETASDKIDYLTGYTYYKRNNLIEDENSVYSIEAGLIAQDVERVLPEAVHSLNSDGKLDPKGEAIKGINYNGVVALLVNAFKEQKVKIDNQQEEINALRNELYELKNLVKSMLNGNAPTITELP
Physico‐chemical
properties
protein length:983 AA
molecular weight: 103123,46790 Da
isoelectric point:4,89062
aromaticity:0,06205
hydropathy:-0,44883

Domains

Domains [InterPro]
DC_0608
ATT
2–192
DC_0608 DC_0659 DC_1205 IPR030392
Coil
Unmapped
132–162
Coil DC_0415 DC_0613
IPR030392
CHP
849–909
IPR030392 Coil
XCH42194.1
1 983
Architecture
ATT
ATT
STR
STR
RBD
ATT 2-192 | ATT 207-278 | STR 279-491 | STR 524-694 | RBD 695-983
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCH42194.1
1 983
Domain Start End Length (AA) Confidence
N-terminal 1 513 513 0,7862
Central domain 514 770 258 0,4649
C-terminal 771 983 212 0,8234
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-513
Central
514-770
C-terminal
771-983

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage PMBT31
[NCBI] 		3153514 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCH42194.1 [NCBI]
Genbank nucleotide accession
PP810246.1 [NCBI]
CDS location
range 20437 -> 23388
strand +
CDS
ATGGCACTTAAAACTAAAATTATTGTACAGCAGATTCTGAACATAGATGACATTACAACTACTGCTAGTAAATATCCTAAGTACACAGTAGTTTTAGGTACTTCTATTAGTTCTATTACTGCTAGCGAACTAACAGCGGCTGTTGAGGCCTCTGCTGCTTCTGCTGCGGCAGCAAAAGATTCTGAAATTGCAGCAAAAGAATCTGAAACAAATGCTAAGGACTCTGAGAACCTATCTGCAAATTATGCTAACTCTTCAGAAGCTTCTGCAACTCAATCTGCTACTTCTGCTACTGAAGCGGAGAGACAAGCTGGTTTATCTAAAGATAGTGCTGATGCCTCTGCTACTTCAGCAGAAGAATCCAAGGGGTTCCGTGATTCTGCTGAACTTGCTGCACAAGATGCTGAACAGAGTCGTCTGCTAGCTGAACAAGCTAAGAAGGACGCTGAAGCTGCTAAGACTGCTGCTGCTACTTCTGAGCAAAATGCTGCTGTATCCGCTACTGAATCTACTAATCAGGCTACTGCTGCTACTGGTTCTGCTACAAAGGCGGGAGAATACGCTACTACTGCAAAAGATTCCGAGATAGCGGCTAAGACTTCAGAACTTAATGCTAAGGATTCTGAGCATGAATCTGCTATTTCTGCTGAAGCTTCTGAAGCTTCTGCTTCTCAATCTGCTATTTCTGCTACTCAATCTGCTGCGTCCGCTACTAAATCTGCAGAATCATCAGCTGCAGCAAAAACTAGTGAAACTAATGCAAAAACTAGTGAGACTAACGCAAAAACTAGTGAGACTAATGCAAAAACTAGTGAGACTAACGCAAAAACTAGTGAGACTAATGCAGCAGCATATGCAGCAGCAGCAAAAACTAGCGAGACTAATGCTGCTGCTTCCGCTGCCTCTGCTTCTGACTCCAAAGGATTCAGGGATGAAGCAGAAGCATTCGCTGCACAAGCCTCCACATCAGCATTAGCAGCAAAAAACTCAGAAATTAATACAAAGACTAGCGAAATTAACTCAAAAGCTAGTGAAGACGCTGCTAAGCTAGCTCAGCAAGGTGCATTAGGTAGTGCGAATACAGCTACGCAAGCGATGACCACAACCAAAGGCTACAGAGACGAAGCAGAGGGATTTAAAAATACCGCCACTACTGCTGCAACGACAGCAACAGACAAGGCCCTGGAGGCTGCTGGTAGTGCTACAATGGCAGGAGAGAAAGCAATTGCAGCTACCAATGCAGCTGACAGAGCGGAAATAGCAGCTGCATCGGCAGAACAGGTTACGCAAGCGTCGTTGAAGAAGGATCAGAACCTTAAAGACCTTACTGATAAAGTTGCTGCAAGGAAGGAACTTCAAATTCAAGCGGTAGTGAGCAAGGACTCTAATAATGTGGGTGATTATAACTCATTCACCAGCCCCAATGTAGTATATGAACTTAGACTGGCTAATGATGGCGGTTGGCGTGTTGCAAGAAATAGTGATAATGCTACATCGGCTCTTCCTATTGGTGCTGGCGGTACTGGTGCGGAAAACGTTGATGGCGCAAAAATAAACTTTGGCATTGATCGTTTAAAGCAAACAGAAACAGAAACTATGATGTACGCACCAGGGATTAACTCACCTTATCGAATCACAATTAGACCTGATGCGGCGTGGGGTGTTTGGACTGATGAAACTGGAAGATGGATTCCTCTTTCAATTGATGCTGGCGGCACTGGATCTAATACTGAAGTTGGCGCAAGAAAGAACTTAAACACTCCTGTTGGTGGTCAAGCAATTACCATCCCGGATAATTCAAACATTCTTGGGTTTATGTCAACATACGCAGAAAGCGGTTATTACTCAAGCGGAGAACTTGTTACATATCAACCACCTGAAGCCTCTGGTTGGTGGATGTATGAATTGCATGTTCACCGTAAAAATGCAAACGGCCATGTTGAGTATGGAAATATTGTTGCAACCACAATGAACGGCAATAAATGGGGTATCATTTGCACTAATGGCTCTTGGGGTGGATGGTACAGGATAGCAAGATCTGATAGGCAATTGATGTTATTAAGTCCTGATGCTCAATCAGCTCTTGGTGATTACTCTATAGCAATTGGTGATCATGACTCTGGTTTGAAATGGGATAGTGATGGTCACATAAGCGCGTTTGCTGATTCAGCGAGAATATTTGCATGGACTCCATCAGGTATAAATACTTACGGGACCATATCCTCTTATGTTGGGGATAATATAAGGGGCATGTATGTAAATGGGACTAGGCGTGGAGATCCAAACGCGCTTATTGCTGGTCCAGTTGAGGGTGGTGCTTTTAGTGCGTGGCGTAGTCGTGCGTCTGGTTTGTTGGTAGAGCATAATAGTTTTGATTCGGCTGTCAACGTATTTAAATCTGTTTATTGGGGTAAGGATTGGATATCGGGAATGGATTCTGTTAAATGGTCCTCTGGAAGTGCTGAGGTTCATCTTTATGTTGGTGGAACTGAGTATATTTTTGATGCCGCTGGTAATGGTAGCGCCTCAAACTGGGTTAGTAGATCTGATATTAGATTGAAAGCGCATTTAAAAGAAATTGAAACCGCATCTGACAAAATTGATTATCTAACTGGTTATACTTACTACAAACGCAATAATCTAATTGAAGATGAAAACAGCGTTTATAGTATTGAGGCTGGATTGATTGCTCAAGATGTTGAAAGGGTTTTGCCTGAAGCGGTTCATTCTTTGAATAGTGATGGTAAGCTAGATCCAAAAGGTGAGGCAATCAAAGGTATTAACTATAATGGTGTTGTCGCACTTCTTGTTAACGCATTCAAAGAGCAAAAAGTAAAGATTGATAATCAACAGGAGGAAATTAACGCATTACGCAACGAGTTATATGAACTGAAAAACCTTGTAAAATCAATGCTTAACGGAAATGCTCCAACAATTACAGAACTACCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ea8debc75ed1bbc4844b92b9fe4066ce991d931d7561681f2d420c22b71e9e58
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5876
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
This phage originates from the Bacteriophage catalogue of the Bacteriophage Competence Centre, Department of Microbiology und Biotechnology, Max Rubner-Institut, Kiel, Germany Sprotte,S. and Brinks,E. 2020-12-18 — GenBank