Protein

View in Explore
UniProt accession
A0A8S5SMV9 [UniProt]
Protein name
Collagen triple helix repeat protein
RBP type
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,89
Protein sequence
MVKKILIGNFKGPKGDTGPTGSTGPKGDKGSKGDTGPAGKDGKDGNIETPTTILNKLKEVDGAGSGLNADLVDDEHSETFARQEILETTMDDLKNTRLVMGRLSDLAGEDGVKLELNYGNSVYGKIISSNPEINTGENAVINFIVNGVSYERTTDANGRAILPIRLDPGSYMLEGIVKRGAAGENPRLEQTRLLIVH
Physico‐chemical
properties
protein length:197 AA
molecular weight: 20908,21760 Da
isoelectric point:5,17538
aromaticity:0,03553
hydropathy:-0,51066

Domains

Domains [InterPro]
DC_0806
STR
9–183
DC_0806
G3DSA:1.20.5.320
STR
11–65
G3DSA:1.20.5.320
A0A8S5SMV9
1 197
Architecture
STR
STR 9-183 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Siphoviridae sp. cteZR38
[NCBI] 		2827906 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAF52389.1 [NCBI]
Genbank nucleotide accession
BK032636 [NCBI]
CDS location
range 26912 -> 27505
strand +
CDS
ATGGTTAAAAAAATATTAATTGGAAATTTCAAAGGACCAAAAGGCGATACTGGACCAACAGGATCAACAGGTCCTAAAGGTGATAAAGGAAGTAAAGGTGATACTGGACCTGCAGGAAAAGATGGTAAAGATGGAAACATTGAAACACCCACAACTATTTTAAATAAATTAAAAGAAGTGGATGGAGCAGGTTCAGGTTTAAATGCAGATTTGGTGGATGATGAACATTCTGAAACATTTGCAAGACAAGAAATATTAGAAACCACAATGGATGATTTAAAAAACACTAGATTAGTAATGGGTCGTTTATCAGACCTTGCGGGAGAAGATGGAGTTAAACTAGAATTAAATTATGGAAATTCTGTTTACGGTAAAATTATTTCTTCCAATCCTGAAATTAACACAGGGGAAAATGCGGTAATTAATTTTATTGTAAATGGTGTTTCTTATGAAAGAACAACTGATGCTAATGGTAGAGCAATACTGCCGATTAGATTAGACCCTGGAAGTTATATGTTGGAGGGTATTGTAAAAAGAGGAGCTGCTGGAGAGAATCCTCGTTTAGAACAAACAAGATTACTGATTGTACATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
cd19844c2a46e6cab877184828ccf0dc451d8e4166bfb44efd7baca06f773229
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7541
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50