Protein

View in Explore
Genbank accession
WZX11504.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MAIAPKTVKTYELDGVKKDFTVPFEYLARKFVVVTLVGSSRRVLTGTEYRFTSSTQVTTTLPWGPSDGYDSIEIRRFTSATERLVDFVDGSILRAYDLNISQVQSLHIAEEARDLTADTIAINDEGELDARGKRIVNLADGIDPGDAVTMRQAGALMPEISGLIKNSMTLNVPSQYPTIQSAFSYLASRAIVAGAIVTIRVADGVYSPGINANHPQGSQIRLIGNQSTPSLCVISASDSFAADGISVSGGNILGFLDGFTFDRASKAEMPLNTTAVLAIQNSTIICGSSIRVNNWFYGIAARDSSYIYCPNAQVNASGDVGIWAFCGSTIVCNGSKSINANAAGQPWGFGFQAEFGSVLVGTGIEASGCKIGGIASLSNSTCRVAASNSHNNIGSGYFARDTGIIEAGGGISSDNSGYGIEVIDGHGQVTGIVSNTGNSLGTANKFIFTSVASYQARVASSSGPLRLDVSDANSVYFNTQGGLQAEVGHTAGATSRLRLTGSTNKYPSITAESGDADCNFRVASKGTGSVEIASGGGRQLEIYNTNNAVNFPVLTGAVAGGAPIFGVSGLDSNIDVRLNAKGSGRVRLGPYQSSADAAIAGYIEVKDSSGTLRKLAVIA
Physico‐chemical
properties
protein length:619 AA
molecular weight: 64361,10530 Da
isoelectric point:5,55910
aromaticity:0,07431
hydropathy:0,02536

Domains

Domains [InterPro]
IPR005604
ATT
1–130
IPR005604 IPR011050
DC_0657
STR
1–614
DC_0657
WZX11504.1
1 619
Architecture
ATT
STR
ATT 1-130 | STR 131-614 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WZX11504.1
1 619
Domain Start End Length (AA) Confidence
N-terminal 1 191 191 0,9371
Central domain 192 451 261 0,9729
C-terminal 452 619 167 0,8374
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-191
Central
192-451
C-terminal
452-619

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage YZU-PF-006
[NCBI] 		3140275 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas fluorescens
[NCBI] 		294 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WZX11504.1 [NCBI]
Genbank nucleotide accession
PP704628.1 [NCBI]
CDS location
range 35214 -> 37073
strand +
CDS
ATGGCAATTGCACCTAAAACAGTCAAGACGTATGAGCTTGATGGCGTCAAGAAGGACTTTACAGTCCCGTTTGAGTATCTCGCTCGGAAGTTCGTTGTTGTTACATTAGTTGGCTCAAGTCGGAGAGTCCTTACGGGCACTGAGTACCGTTTCACAAGCTCCACGCAGGTCACTACCACATTACCTTGGGGTCCATCCGATGGTTACGACTCAATTGAGATTCGGAGGTTCACATCGGCAACTGAACGTCTCGTTGATTTTGTCGATGGTTCCATCCTCAGGGCATACGACCTGAATATTTCTCAGGTGCAATCTCTTCACATTGCTGAGGAAGCGCGTGACCTTACAGCGGACACAATCGCAATCAATGACGAAGGTGAACTCGATGCACGTGGCAAGCGAATAGTTAATCTCGCAGATGGCATTGATCCAGGTGATGCGGTGACAATGCGGCAAGCGGGTGCCCTTATGCCTGAAATTAGCGGGTTAATCAAGAACTCGATGACACTTAACGTCCCGTCTCAGTACCCAACTATTCAATCAGCATTCTCTTATCTGGCAAGCCGAGCAATTGTGGCCGGTGCCATTGTTACAATCCGAGTCGCTGACGGGGTTTATTCGCCGGGAATCAATGCCAACCATCCACAAGGTTCACAGATCAGGCTGATTGGAAACCAATCCACACCAAGTCTATGCGTGATTAGTGCATCGGATTCATTTGCAGCAGACGGGATTTCAGTATCCGGTGGGAATATCCTTGGATTCCTCGACGGCTTTACGTTTGATCGTGCATCCAAGGCAGAGATGCCATTGAACACTACGGCAGTCCTCGCCATACAGAACTCGACAATCATATGTGGTAGTTCCATCCGGGTTAATAACTGGTTCTATGGAATTGCCGCCCGTGACAGCTCGTATATCTACTGCCCAAACGCACAAGTCAACGCATCTGGTGATGTCGGCATCTGGGCCTTCTGCGGGTCTACAATCGTTTGCAATGGCTCTAAATCCATTAACGCCAATGCCGCTGGACAGCCGTGGGGTTTTGGATTCCAAGCGGAATTTGGGTCTGTCCTCGTTGGCACCGGCATTGAGGCCAGCGGTTGTAAGATCGGAGGAATCGCAAGCCTAAGTAACTCCACCTGTCGAGTTGCTGCTTCCAACTCGCATAATAATATCGGAAGCGGATATTTCGCTCGTGACACTGGTATCATCGAGGCAGGAGGTGGCATATCTTCAGATAACTCAGGTTACGGAATCGAGGTCATTGATGGACATGGCCAGGTGACGGGCATTGTGTCCAATACCGGCAACTCGCTGGGTACTGCGAATAAATTCATATTTACATCCGTTGCATCATACCAAGCCAGAGTGGCATCTTCGTCTGGGCCACTTCGTCTGGACGTATCTGATGCAAACTCAGTGTATTTTAACACCCAGGGCGGACTGCAAGCTGAGGTAGGTCACACCGCTGGCGCAACGAGCAGACTTCGGCTAACAGGATCGACGAATAAATACCCAAGCATCACTGCTGAATCTGGAGATGCTGATTGTAACTTCCGAGTTGCATCCAAAGGAACAGGGTCAGTGGAAATTGCCTCTGGCGGTGGCCGTCAGCTTGAGATTTACAACACCAATAACGCTGTGAACTTCCCAGTTTTAACCGGTGCGGTAGCTGGTGGTGCGCCGATCTTTGGCGTGTCCGGCCTTGATTCAAATATTGACGTTCGTTTGAATGCAAAAGGCTCAGGAAGGGTCCGGTTAGGTCCATACCAGTCGAGCGCAGACGCGGCGATAGCTGGTTACATAGAAGTGAAGGACTCAAGTGGAACCCTCAGAAAACTGGCTGTTATTGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8b4fbeae17edca63b9150158b16bba73cedb365f6b5ff4347565298bbe3aa463
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7708
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50