Protein

View in Explore
Genbank accession
XHB24073.1 [GenBank]
Protein name
hinge connector of long tail fiber protein distal connector
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
TF
Evidence RBPdetect2
Probability 0,92
Protein sequence
MADLKAGSTVGGNPIWHAGTFPLVPAGNSLTYRGKKVYTEIDKPQANDNDFVSKSRGGTYTGEVKIAYGGSGKLSMGPLANVGIRVGGSNGEVLIIGGNSTIQLRGGGTEDSSGIVEIAKNGNLTAQTGRITANVFTSKQQPSGVDDLTRKDYVDGRINTVSNVANAAVKKAGDTMTGVLRANAGVVIVNKATSGEYAPRLDQVISRGVTIDFGTY
Physico‐chemical
properties
protein length:216 AA
molecular weight: 22309,73010 Da
isoelectric point:9,39519
aromaticity:0,05556
hydropathy:-0,24444

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XHB24073.1
1 216
Domain Start End Length (AA) Confidence
N-terminal 1 190 190 0,2783
Central domain 191 205 16 0,0241
C-terminal 206 216 10 0,9445
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-190
Central
191-205
C-terminal
206-216

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_Kpn529046-KEN25_2
[NCBI] 		3142665 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella sp.
[NCBI] 		576 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XHB24073.1 [NCBI]
Genbank nucleotide accession
PP723048 [NCBI]
CDS location
range 55692 -> 56342
strand +
CDS
ATGGCCGATTTAAAAGCAGGTTCAACAGTTGGCGGAAATCCTATTTGGCACGCGGGTACTTTTCCTCTTGTGCCGGCAGGAAACTCCCTAACTTATAGAGGTAAGAAGGTTTATACTGAGATAGATAAACCTCAAGCAAATGATAACGACTTCGTGTCCAAATCCCGTGGTGGTACGTATACAGGCGAAGTAAAAATAGCATATGGCGGCTCTGGCAAGTTAAGCATGGGTCCGTTGGCAAATGTTGGTATTAGAGTCGGTGGTAGTAATGGTGAAGTTCTTATCATCGGAGGGAATTCAACAATTCAATTGCGCGGCGGCGGAACGGAAGATTCCAGCGGCATAGTTGAAATTGCTAAAAATGGTAACTTAACTGCACAGACTGGTAGAATTACCGCTAACGTATTTACTTCTAAACAACAGCCATCTGGCGTAGACGATTTAACTCGTAAAGATTATGTTGATGGACGAATAAATACTGTTAGCAACGTAGCTAACGCAGCAGTCAAGAAAGCTGGTGATACCATGACCGGTGTACTTAGGGCTAACGCTGGCGTAGTTATAGTAAATAAAGCAACATCCGGTGAATATGCTCCTAGATTAGATCAGGTTATTTCACGCGGGGTAACAATAGATTTTGGCACATACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f3dec03ac7691a37ac2d0efec4b1ba68c91ed0479077e31b7ad6dae3fc8d7745
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7089
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequences of Five Klebsiella Phages That Belong to the Genus Jiaodavirus Burke,K.A., Peters,T.L., Kirillina,O.A., Urick,C.D., Mzhavia,N., Musila,L., Nikolich,M.P. and Filippov,A.A. 2024-12-12 — GenBank