Protein

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Genbank accession
XMR01146.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MSSKRIIGSAAILGNLAIGGKYAMRTFNGTAPDANTGIVDYPIYKRSEVQKILDMLPISRIGEMDYLPLNVNGSYEGATSLSDVYRMQPTIVEDDGTGVVLRAGTNGSTEGYYYAFIRDLRNIDALTQSSVISTTSKYHPRILPSTENVKQFIGTNGYELLVSLSSASNYIFTLTNGTFNEVAHIHASIAATAFGTDKPLYAHIVNDKVFVWCKDTTIANYGLALTLYTVNTSSIKDGTMSTFAKVTGFSGQTLRSVNYTSANNLKIYERLYSVGTSSDSLFECTSPVTRVEYSDYTDYNIQANVSPDLSKIRITLFPTNRLVSNLYISTVYASGFSFVYTINSKSLSIDGSSRAPIAAEYNDVDGFTLTNPFAIEMNNFMGTQLGVPQLGNVGSICQTYDGLVFSTRARWSSSETYGIQVYNVTGTPYDSWVASTRKANNSKFVNVAPTYGSAVGENLLGTRFIDKRKVLLACSGTYEDESYGYNNTVFSEIGTDPTFQFNSVQNNTTLNGFAPQANRTRLGDNYKYTGMISLIDTDGSVKCYGTSFIEGVYKTSGGLFNPDTLEFDGSYTIGDNVLETLKQEILANIGIVGAFTGKIALYYVPDSSFSKSIAVVSAYNLGNNQGYAIYSEVDVTISGTNISSATMVSSRYETLNSVTGIVTEAYMKRCTGLTVAKYSGFGYIGVDAVHQFSQPGNAQFKLMIAKTVNGLITSNRFMSSSYIDNGNAFQHGVIPGVGFGYYHLQDSDYQTKAVFSLFGTTSAQMDGLIDGSGTVQDKIVVVSQDVAEGFTVYFTREVPVFLGGMFDRLAIQTIELSTIKTNPANSTFYLYIQMNRNTRKAAYVISTTLLDETLTNVYVGDIVTGSTSITSIDTEKVTRFLTYRPSTTKRGSAIPASTGVPSSSGTRWH
Physico‐chemical
properties
protein length:909 AA
molecular weight: 98918,62420 Da
isoelectric point:5,67829
aromaticity:0,11331
hydropathy:-0,09703

Domains

Domains [InterPro]
DC_0236
STR
1–909
DC_0236
XMR01146.1
1 909
Architecture
STR
STR 1-909
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XMR01146.1
1 909
Domain Start End Length (AA) Confidence
N-terminal 1 61 61 0,9808
Central domain 62 595 535 0,9197
C-terminal 596 909 313 0,6804
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-61
Central
62-595
C-terminal
596-909

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage Turkey3
[NCBI] 		3375710 Viruses >
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XMR01146.1 [NCBI]
Genbank nucleotide accession
PQ471515 [NCBI]
CDS location
range 103075 -> 105804
strand +
CDS
ATGTCATCCAAACGCATCATTGGTAGTGCTGCTATACTTGGAAATTTGGCAATTGGTGGAAAGTACGCTATGCGTACTTTTAATGGTACAGCACCAGACGCAAATACAGGTATTGTTGACTATCCAATTTATAAAAGATCAGAAGTTCAAAAAATACTTGATATGTTACCAATCTCCCGTATAGGGGAGATGGATTATCTACCATTAAACGTTAATGGTTCATACGAAGGGGCAACGTCGCTTTCAGATGTATACCGTATGCAGCCAACAATAGTCGAAGATGATGGTACTGGTGTGGTATTACGTGCTGGTACAAATGGTAGTACTGAAGGATATTACTATGCATTCATTCGTGATTTGCGTAATATTGATGCACTAACACAAAGTAGTGTTATCAGTACTACATCAAAATATCATCCGAGAATTCTTCCAAGTACTGAAAATGTTAAACAGTTCATCGGAACGAATGGTTATGAATTGCTAGTTAGCCTATCTAGTGCAAGTAATTATATTTTCACTTTAACAAATGGTACATTTAACGAAGTTGCACATATTCACGCTTCTATCGCTGCTACAGCATTTGGTACAGATAAACCATTATATGCACATATCGTCAATGATAAAGTATTTGTGTGGTGCAAAGACACTACTATAGCAAACTATGGTTTGGCTTTAACATTATATACTGTTAATACAAGTAGTATTAAAGATGGTACTATGAGTACTTTTGCTAAGGTTACTGGTTTTTCTGGTCAAACCTTAAGAAGTGTTAACTACACAAGTGCTAATAATTTGAAAATTTATGAAAGATTATATTCAGTTGGAACTAGTAGTGATTCATTATTTGAATGCACTTCACCAGTTACACGAGTTGAATATTCAGATTATACAGATTATAATATACAAGCAAACGTAAGTCCCGATTTATCAAAGATTAGAATTACATTATTCCCAACTAACCGTTTAGTATCAAATCTATATATTAGTACTGTTTATGCTAGTGGTTTTAGTTTTGTTTACACGATCAACTCTAAATCATTATCAATTGATGGAAGTAGTAGAGCACCAATAGCAGCGGAATATAATGATGTTGATGGATTCACATTAACAAACCCATTTGCCATTGAGATGAATAACTTCATGGGTACACAGTTAGGTGTTCCGCAATTAGGCAACGTTGGTTCTATATGCCAAACCTATGACGGTTTGGTATTCAGTACTCGTGCTCGTTGGAGTTCTTCTGAAACCTATGGTATTCAGGTTTATAACGTAACAGGAACACCATATGATAGTTGGGTTGCCAGTACTCGCAAAGCGAACAATTCTAAATTTGTAAACGTTGCCCCAACATATGGTAGTGCAGTAGGTGAAAACCTTTTAGGAACACGTTTTATTGATAAACGTAAAGTACTGTTAGCATGTTCTGGAACATATGAAGATGAGTCATATGGTTATAACAATACAGTATTTTCTGAAATTGGTACTGATCCAACCTTCCAGTTCAATTCAGTACAAAACAATACAACACTTAATGGTTTTGCACCACAAGCCAACCGAACTCGCCTCGGCGACAACTACAAATATACAGGTATGATTTCATTAATTGATACTGACGGTTCAGTTAAATGTTATGGGACATCATTCATTGAAGGTGTATACAAAACAAGTGGTGGTTTGTTTAACCCAGATACTTTAGAATTTGATGGTTCTTATACAATTGGTGATAATGTTCTGGAAACATTAAAACAAGAAATACTTGCTAATATTGGAATAGTAGGAGCATTTACTGGTAAAATTGCTTTATATTATGTACCAGATAGTTCTTTCTCAAAATCTATTGCGGTGGTTTCTGCATATAACTTAGGCAATAACCAAGGTTATGCAATATATTCTGAAGTTGATGTTACAATTTCAGGAACCAATATTAGTTCTGCGACTATGGTGAGTTCTAGATACGAAACACTTAATTCTGTAACAGGTATTGTAACTGAAGCCTATATGAAACGCTGTACTGGTCTAACTGTTGCAAAGTATTCTGGCTTTGGTTATATTGGGGTTGATGCAGTTCATCAGTTTTCACAACCAGGTAATGCTCAATTCAAATTGATGATTGCTAAAACAGTGAATGGTTTGATTACATCTAACCGTTTTATGTCATCCAGCTACATAGATAATGGCAATGCATTCCAGCACGGAGTTATACCAGGTGTTGGATTTGGATACTATCATCTACAAGATTCAGATTATCAAACCAAAGCAGTGTTTAGTCTCTTCGGGACAACATCAGCACAGATGGATGGGTTGATTGATGGTTCAGGAACTGTACAAGATAAAATCGTAGTAGTTTCACAAGATGTTGCTGAAGGTTTCACTGTGTACTTCACCCGTGAAGTTCCGGTATTCCTTGGTGGTATGTTTGATAGATTAGCGATTCAAACCATAGAATTAAGTACTATTAAAACTAACCCAGCTAACAGTACTTTTTATCTTTACATTCAAATGAACCGTAACACAAGAAAAGCGGCATACGTTATCAGTACAACTCTTCTTGATGAGACATTGACAAACGTATACGTTGGTGATATTGTTACTGGAAGTACGAGTATCACGTCAATTGATACGGAAAAGGTAACACGATTCTTGACATACAGACCTAGTACAACCAAGCGTGGTTCTGCTATCCCTGCAAGTACTGGTGTTCCTTCAAGCTCTGGTACACGTTGGCATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b9563efcb05c727f09b29c8c96f0381879a73e53db1178fd78ea52d0c5a93f67
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3827
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Transient expression effect of genes from a Jumbo E. coli phage Petrzik,K. and Brazdova,S. 2023-07-26 — GenBank