Protein

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Genbank accession
XPQ48899.1 [GenBank]
Protein name
major head protein
RBP type
TSP
Evidence DepoScope
Probability 0,99
Protein sequence
MVVHQNLSRFIFRSGDARTIGPINNLKVVETNFDSMIGKMYIVPTNDSNNETINPLAGIGVLVSKENVVVQGNITTKPLTRWRVLVFWYRRRTWSYRVTSAVTTATSVS
Physico‐chemical
properties
protein length:109 AA
molecular weight: 12317,03030 Da
isoelectric point:10,61828
aromaticity:0,09174
hydropathy:-0,06789

Domains

Domains [InterPro]
IPR057920
STR
3–75
IPR057920
XPQ48899.1
1 109
Architecture
STR
STR 3-75 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XPQ48899.1
1 109
Domain Start End Length (AA) Confidence
N-terminal 1 70 70 0,1494
Central domain 71 98 29 0,0066
C-terminal 99 109 10 0,9938
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-70
Central
71-98
C-terminal
99-109

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PQ1
[NCBI] 		3388586 Viruses >
Host Pseudomonas sp.
[NCBI] 		306 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XPQ48899.1 [NCBI]
Genbank nucleotide accession
PQ516283 [NCBI]
CDS location
range 114731 -> 115060
strand +
CDS
GTGGTCGTCCATCAGAACTTGAGCCGTTTCATCTTCCGTTCGGGTGATGCGCGGACCATTGGTCCGATCAACAACCTGAAAGTGGTTGAAACCAACTTCGACAGCATGATCGGTAAGATGTACATCGTTCCGACCAACGATTCCAACAACGAAACCATTAACCCGCTGGCGGGTATTGGTGTTCTGGTATCGAAGGAGAACGTGGTCGTACAGGGTAACATCACAACGAAACCATTAACCCGCTGGCGGGTATTGGTGTTCTGGTATCGAAGGAGAACGTGGTCGTACAGGGTAACATCAGCCGTGACAACAGCGACTTCGGTGTCGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
63f24718db05d3f7a427a0b59a340e5a6601a189872357b439f092589d41f0bb
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,2968
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50