Protein

View in Explore
Genbank accession
AXH70979.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,78
Protein sequence
MSLIRLVKLVDGVATGLGTVIRTQDSPYPVQASYNEFRPTENYLKDHVTFYNGELYQAKADIAAGQWNIDHWTAVNEYVGYIQEYQAGETYNLDEFVIHNDRLYKTKEDGITGTWDVSRWEELTANTTVETINAYLIDNHQLNKPLSSAVLKGNVRKLYLADGSIPGETSGVTAKIKTLIGYYPTWRTEFFGSGNTDLTIRKPSNSPSAFSHVKLSFAHTKPVFDPTSPDLTGIGFNTQSGLEAAFKEDIGKLRARGTKVYLSVGGATYGRPDVADAWTGLIDESDIIDAGSNDYPAQTPYTKALVDVIEYLDLDGIDLDFEDDMAWHTNVRTTWLDNQYKLLRLFRFIADTAGTALGRPIATATACWSTGWDSSAGSVADIATPDYDGNKVSYFGGSAGRDRSLYGGYTSVDLGGVMNASSFVDVFVNMTYDAIFSDFAGNEDPAGPFDSNYDPVKAYEQCRSIITDPNKICTIGVTNNPGFGDHELMVYSNQCAPSGPHPTVLDKDQYGNVIDAPFSVQRVTEAIEANLTQYPNDGIIQWSIYAIDPTTSYVHEGNAEASWKDIVDYVATKM
Physico‐chemical
properties
protein length:574 AA
molecular weight: 63177,15940 Da
isoelectric point:4,55135
aromaticity:0,11498
hydropathy:-0,33902

Domains

Domains [InterPro]
DC_1986
ATT
6–82
DC_1986 G3DSA:3.20.20.80
G3DSA:2.10.10.90
STR
36–123
G3DSA:2.10.10.90 IPR001223
DC_1986
ATT
77–149
DC_1986 IPR017853
AXH70979.1
1 574
Architecture
ATT
ATT
STR
ENZ
ATT 6-149 | ATT 174-433 | STR 434-559 | ENZ 560-574
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AXH70979.1
1 574
Domain Start End Length (AA) Confidence
N-terminal 1 255 255 0,5738
Central domain 256 477 223 0,7031
C-terminal 478 574 96 0,9537
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-255
Central
256-477
C-terminal
478-574

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage BONAISHI
[NCBI] 		2283011 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio coralliilyticus
[NCBI] 		190893 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXH70979.1 [NCBI]
Genbank nucleotide accession
MH595538 [NCBI]
CDS location
range 235508 -> 237232
strand +
CDS
ATGTCACTTATTCGCTTAGTTAAGCTAGTAGACGGCGTTGCAACAGGACTGGGCACTGTCATTAGAACACAAGACAGTCCATATCCTGTACAAGCTAGTTATAACGAATTTAGACCCACAGAGAACTATCTTAAAGATCATGTCACTTTCTATAACGGAGAGTTATATCAGGCCAAGGCAGACATTGCCGCTGGTCAATGGAATATCGATCACTGGACAGCGGTCAACGAGTACGTAGGTTATATACAGGAATATCAAGCAGGAGAAACTTACAATCTTGATGAGTTTGTTATCCATAATGATCGTCTTTACAAAACCAAAGAGGATGGAATTACAGGCACATGGGATGTAAGTCGATGGGAAGAACTAACGGCTAATACGACTGTCGAAACCATCAATGCCTACTTAATCGACAACCACCAATTAAATAAACCTTTATCTAGTGCGGTACTAAAAGGGAATGTAAGAAAGCTGTACTTAGCAGACGGTTCTATTCCTGGAGAAACTAGTGGAGTAACGGCTAAAATAAAAACACTTATTGGCTATTACCCTACATGGCGTACAGAGTTCTTTGGCTCAGGTAATACCGACCTAACGATTCGTAAGCCGTCTAATAGTCCTAGTGCTTTTAGCCACGTTAAACTATCCTTTGCTCACACTAAGCCTGTGTTTGATCCTACTAGTCCCGATTTGACCGGGATTGGTTTTAATACTCAATCTGGATTAGAAGCTGCCTTTAAAGAAGACATCGGTAAACTAAGAGCTCGTGGTACAAAAGTCTATCTGTCTGTAGGAGGAGCCACTTACGGAAGACCTGACGTTGCTGATGCGTGGACTGGACTTATTGATGAATCCGACATTATTGATGCTGGCAGCAATGACTATCCTGCACAGACTCCTTACACTAAAGCTTTAGTTGATGTGATCGAGTACTTAGACTTGGATGGGATTGATCTGGACTTTGAAGATGATATGGCCTGGCATACTAACGTTCGAACAACATGGCTAGACAATCAATATAAGCTACTGCGTCTATTTAGGTTCATCGCTGATACAGCAGGCACTGCTTTAGGAAGACCTATTGCGACAGCTACTGCATGTTGGTCAACCGGATGGGATAGCAGCGCAGGGAGCGTTGCAGACATTGCTACTCCAGACTACGATGGAAACAAGGTTTCTTACTTTGGAGGATCGGCTGGTCGAGACAGAAGTCTGTACGGAGGTTACACATCCGTAGACTTAGGTGGCGTGATGAACGCATCCAGCTTTGTTGATGTCTTTGTCAATATGACCTATGATGCAATATTTTCAGATTTTGCAGGTAATGAAGATCCTGCTGGGCCTTTCGATTCTAACTACGATCCCGTTAAAGCTTATGAGCAGTGCCGCAGCATCATTACCGATCCAAATAAAATCTGTACCATAGGGGTTACTAACAATCCAGGGTTTGGAGATCATGAACTTATGGTCTACAGTAACCAGTGTGCTCCCTCAGGGCCTCATCCTACGGTTTTAGACAAGGATCAATACGGTAACGTCATTGACGCTCCTTTCTCTGTTCAGAGAGTCACTGAGGCGATTGAAGCAAATCTCACCCAGTATCCTAATGACGGAATTATTCAATGGTCGATTTATGCGATTGATCCGACAACGTCATATGTCCATGAGGGGAATGCCGAAGCATCCTGGAAAGACATCGTGGATTATGTAGCAACTAAAATGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8e9b9d22b7d7291189dc07c6e2aed09c8484cf272990869471bd753897c5a186
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6003
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Therapeutic potential of a new jumbo phage that infects the coral pathogen Vibrio coralliilyticus Jacquemot,L., Bettarel,Y., Monjol,J., Corre,E., Halary,S., Desnues,C., Bouvier,T., Ferrier-Pages,C., Van Ngoc,B. and Baudoux,A.-C. 2018-10-24 — GenBank