Protein

View in Explore
Genbank accession
AQT25205.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MKHLLPSAIDFISNSANPLRIANLVVIELPSNGGSPQYAYYTDYGRDIVYNGTTYISGKIKSISSHKQNRKLTVGSLSITMSGVDNVELGRLVASGVSFIDRTVIIYQAFLDSNGEIVPTDSDTKGAYKYFSGKISSGNVRESNNGNTRSSVITWTCNNMFYDFERVNGRITDDASHRGLEVIDGKLVPTKSAKKIEYMDDLGFFHSNKSITILAKYQAKEKRYKLKSKSSFFGLSKKYSLVEYYENVTRSIDIDFNLTAKFIPVVYGVRQVPGIPVFADTDASDPETVWVVYAFAEGEIEGFLDFSFNDVPMICYDDADSKDRTCFGRKRYAGDTMHRLASGVATSSPSVHGQEYKYNDGNGDIRVWTYHGLSDQEASRVLVDKAKARGFLLQRNQGMGPEYWDENYKLLDTAYAVVRFKLTENRTEIPQVDATVLGRKVRTYSRDGTIKADRTTLNGIWQTVDYLTSTTFGANVSLELINMERAIDSAEIIDTIDESYDGAWVNYWRYLGWNNMSDSNRQMIQMNTVIDTAESVFKNVEVLLDGYSGSLNNMLGVYGITVEKYDPNPRKIHYLETNGSVELEDITGRNKFNSVQASIIDPALAWKSSTVTFYNSEFKRADNDVDKRLNLSFANITNYYTARSMAARELKKSRYNRVLKLELPISHLGIEVNDAVSFTYDRYKWKDKYFLVDEVEVSSSGKIKVSLREYGEDVFINSQQVENPEVPPIIEALVTPPRDLQYTPYKDNTSIGKNGTLSWLPSITPGIAYYTVYQTDRLDPYVVTSNVTSLNSRLELDLFGLTEGTYTFEVRAVDVTGRRSSPVVLTLNIDAARNLSVVTNFKLVNRAPGSFTDWIGPDVITEWDGIKEEKEITGLRYVFQFLHPQSLSIIYSSATTNGHRSIYQYAQNKSDYMKLNNALGVFREGVIRVRAEGPNGEASVAWTYLND
Physico‐chemical
properties
protein length:947 AA
molecular weight: 106759,47850 Da
isoelectric point:5,72581
aromaticity:0,11193
hydropathy:-0,38490

Domains

Domains [InterPro]
DC_0187
STR
230–928
DC_0187
IPR032876
ATT
592–693
IPR032876 IPR013783
IPR036116
STR
735–822
IPR036116
IPR003961
STR
736–818
IPR003961
AQT25205.1
1 947
Architecture
STR
ATT
STR
STR 230-591 | ATT 592-693 | STR 694-928 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AQT25205.1
1 947
Domain Start End Length (AA) Confidence
N-terminal 1 309 309 0,9090
Central domain 310 525 217 0,4115
C-terminal 526 947 421 0,0162
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-309
Central
310-525
C-terminal
526-947

Taxonomy

  Name Taxonomy ID Lineage
Phage Providencia phage vB_PreS_PR1
[NCBI] 		1931407 Uroviricota > Caudoviricetes > Demerecviridae > Priunavirus PR1 >
Host Providencia sp.
[NCBI] 		589 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AQT25205.1 [NCBI]
Genbank nucleotide accession
KY363465.1 [NCBI]
CDS location
range 85707 -> 88550
strand -
CDS
ATGAAACACTTACTTCCGTCAGCAATTGACTTTATATCCAATTCTGCTAATCCTCTACGTATAGCTAACCTAGTGGTAATTGAGCTGCCTAGCAATGGTGGTAGCCCACAGTATGCCTACTATACTGATTACGGTAGAGATATAGTGTACAATGGAACCACATATATAAGCGGTAAAATAAAGAGCATTTCTTCTCATAAACAAAATAGAAAACTTACCGTAGGTTCTCTTAGCATTACAATGAGTGGGGTAGACAACGTAGAGCTAGGAAGGCTAGTTGCGTCGGGAGTATCTTTTATAGATAGAACTGTAATCATATATCAAGCCTTTCTAGACTCTAATGGTGAAATTGTACCAACAGACTCTGATACTAAAGGGGCATATAAATATTTTTCGGGTAAGATATCTTCCGGCAATGTTAGAGAAAGCAATAATGGTAATACTCGTAGCTCAGTAATCACATGGACATGTAATAATATGTTCTACGATTTTGAAAGGGTGAATGGGCGCATAACCGACGATGCGTCTCATAGGGGTCTTGAAGTTATTGACGGTAAACTAGTACCTACTAAAAGTGCCAAAAAGATTGAGTATATGGATGATCTAGGGTTTTTCCACTCTAACAAGTCTATTACTATTCTTGCCAAGTACCAAGCAAAAGAAAAACGTTATAAACTAAAATCTAAGAGTTCTTTCTTCGGGCTGTCTAAAAAGTATAGCTTAGTCGAATACTATGAGAACGTAACTAGATCCATTGATATAGACTTTAACTTAACAGCAAAATTTATTCCTGTAGTATATGGAGTTAGGCAAGTTCCGGGTATACCAGTATTCGCAGATACAGATGCTAGTGACCCAGAGACAGTATGGGTTGTGTATGCCTTTGCTGAGGGAGAGATAGAAGGCTTCTTAGACTTTTCGTTTAATGATGTGCCTATGATCTGTTACGATGATGCAGACAGTAAAGACAGAACTTGTTTTGGTCGTAAAAGATACGCTGGGGACACTATGCATCGTCTGGCCTCTGGTGTAGCAACATCTTCTCCATCCGTGCATGGTCAAGAGTATAAGTATAACGATGGTAACGGGGACATCCGAGTATGGACATATCATGGGCTGAGTGACCAAGAGGCTTCTAGAGTACTGGTTGATAAGGCTAAGGCTAGAGGTTTCTTGTTACAGAGAAACCAGGGTATGGGACCTGAGTACTGGGATGAGAACTATAAGCTTCTTGATACTGCGTATGCTGTTGTAAGATTTAAGCTAACTGAAAATAGAACAGAAATACCACAAGTGGACGCAACTGTCCTTGGAAGGAAGGTAAGAACCTATTCTAGGGATGGAACTATTAAGGCTGATAGAACTACGTTAAATGGGATATGGCAAACTGTAGACTATTTAACCTCTACTACTTTCGGTGCTAACGTTAGTCTTGAATTAATCAATATGGAGAGAGCTATTGATTCTGCTGAGATTATAGATACTATAGATGAATCATATGATGGTGCTTGGGTAAACTATTGGAGATATTTAGGCTGGAATAACATGTCTGACTCCAATAGGCAGATGATTCAGATGAATACAGTAATAGATACGGCAGAGTCTGTATTTAAGAACGTAGAGGTACTACTTGACGGGTACAGTGGCTCGTTAAACAATATGCTAGGGGTATATGGTATAACCGTAGAGAAGTATGACCCTAACCCAAGAAAGATACACTACCTTGAAACTAACGGCTCCGTAGAGCTTGAAGATATAACTGGTAGAAACAAATTTAACTCAGTACAGGCGTCTATAATAGATCCTGCCCTTGCTTGGAAGTCTAGCACTGTTACTTTCTACAACTCTGAGTTTAAACGTGCAGATAACGATGTTGATAAGAGACTTAATTTATCTTTTGCTAATATCACCAACTACTACACGGCAAGATCTATGGCGGCTAGGGAACTTAAAAAGTCACGATATAACAGGGTATTAAAACTTGAGTTACCTATATCACATCTTGGTATAGAGGTTAATGATGCTGTTAGCTTTACGTATGATAGATATAAGTGGAAGGATAAGTACTTCTTAGTAGACGAAGTAGAGGTTTCCTCTTCCGGTAAGATAAAGGTATCCTTGAGGGAGTATGGGGAAGATGTATTTATTAACTCCCAACAGGTAGAAAACCCTGAAGTACCACCTATTATTGAGGCGTTAGTAACTCCGCCTAGAGATCTTCAATACACCCCGTATAAAGATAATACTAGTATAGGTAAGAATGGAACACTAAGCTGGTTACCTAGTATAACACCTGGAATAGCCTACTACACAGTGTATCAAACAGATAGGTTGGATCCTTATGTAGTAACAAGTAACGTAACTAGCCTTAACTCTAGATTAGAGCTAGATTTATTTGGGTTAACTGAGGGCACATATACTTTTGAAGTAAGAGCAGTAGATGTTACTGGTAGACGAAGTTCACCAGTAGTTCTAACCTTGAACATAGATGCAGCTAGAAACCTTAGTGTAGTAACTAATTTTAAATTAGTTAACAGAGCTCCTGGTTCTTTTACTGATTGGATCGGTCCTGATGTTATCACTGAGTGGGATGGCATAAAAGAGGAAAAAGAAATAACTGGGCTAAGATATGTGTTCCAATTTCTACATCCTCAATCACTGAGTATTATCTACTCGTCTGCAACAACCAACGGTCACCGTAGCATTTACCAGTACGCACAAAATAAATCAGACTACATGAAACTTAATAATGCTCTGGGAGTTTTCCGTGAGGGCGTAATTAGGGTTCGAGCAGAGGGACCTAACGGGGAAGCCTCAGTCGCATGGACATACTTAAATGATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
62433753e5bdff4660cad5f6a6739eadf50cd483c7f3159bebbbe25dd9c9bfa3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8134
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Providencia rettgeri phage vB-PreS_PR1 - a deep-branching member of the T5-like siphoviruses Oliveira,H., Pinto,G., Hendrix,H., Noben,J.-P., Gawor,J., Lobocka,M., Lavigne,R. and Azeredo,J. 2017-12 — GenBank