Protein

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Genbank accession
YP_009817715.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MRTTATGTSSRAMERHLGHSYKTILMIQERIPWMEEFLDAVTGQLEGYIGVYPEEPTQMPDGDPLVAGVFYVNSTDKYLYFYMGDGLWTSVYDQTQAGMQELSEATAQALLDLETALATHLITLATATGDHITNIDDVVAAHMVDIDAKLATLADSLAQAQVAAQESRDYRDESLGYRDESEGFRDESEVNATESRQSADASLVNKNFSTVEADRAKAEADRAAALGSDFTDNAEIEIQRIVDEGDAQVTRVTTTGNTQNTRLITQGDTQFTKVKTEGDTQYASIVAEGTVQRDLSKQEANRSATEATASALARDEAEYHADRAEYSTALAHNNALKIAQGM
Physico‐chemical
properties
protein length:342 AA
molecular weight: 37350,42920 Da
isoelectric point:4,40732
aromaticity:0,06433
hydropathy:-0,48480

Domains

Domains [InterPro]
DC_2093
STR
50–179
DC_2093
YP_009817715.1
1 342
Architecture
STR
STR 50-179 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.261.O._10N.286.51.A7
[NCBI] 		1881237 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio breoganii
[NCBI] 		553239 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009817715.1 [NCBI]
Genbank nucleotide accession
NC_048125.1 [NCBI]
CDS location
range 16696 -> 17724
strand +
CDS
ATGAGAACTACAGCAACAGGTACTTCTTCAAGAGCAATGGAGCGTCACTTAGGTCACTCCTATAAAACCATTCTGATGATTCAGGAACGTATCCCTTGGATGGAAGAATTCCTAGATGCGGTAACTGGACAGTTAGAAGGGTACATCGGTGTTTACCCAGAAGAGCCAACACAGATGCCTGATGGCGACCCATTGGTTGCAGGTGTCTTCTATGTAAACAGCACAGACAAATATCTGTACTTCTATATGGGTGATGGTCTTTGGACTTCGGTATATGACCAGACCCAAGCAGGTATGCAAGAACTGAGTGAAGCTACAGCTCAAGCCCTCCTAGATTTAGAGACGGCTCTAGCAACTCACCTGATTACTTTGGCTACAGCCACAGGCGACCACATTACCAATATTGATGATGTAGTTGCTGCGCACATGGTTGATATTGATGCCAAGCTTGCAACGTTAGCTGATTCATTAGCACAGGCTCAGGTTGCTGCACAGGAGTCACGAGACTACCGTGATGAGTCCTTGGGGTATCGTGATGAGTCTGAAGGTTTCCGTGATGAATCAGAAGTCAATGCTACTGAATCTCGTCAATCTGCTGATGCTTCTCTTGTTAACAAGAACTTCTCTACAGTGGAAGCAGATAGAGCAAAAGCTGAAGCTGACCGAGCTGCTGCCCTAGGCAGTGACTTTACTGATAATGCTGAGATAGAAATTCAACGTATTGTTGATGAAGGTGATGCCCAAGTTACTAGAGTAACTACAACAGGTAACACACAGAACACCCGTCTCATTACACAGGGTGACACTCAGTTTACTAAGGTAAAAACGGAAGGTGATACACAGTACGCTTCGATTGTAGCAGAGGGTACTGTTCAACGTGACCTATCAAAGCAAGAAGCTAACCGTTCAGCTACTGAGGCAACAGCTTCGGCACTGGCTAGAGATGAAGCAGAATACCACGCTGACAGAGCAGAATACTCTACAGCACTGGCACACAATAACGCACTTAAAATAGCACAGGGGATGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5c24a44187f191b9c19036e0d750100c137cd715e4add3afb48f9546fcf8b2a5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7493
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank