Protein

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Genbank accession
QDB71534.1 [GenBank]
Protein name
capsid and scaffold protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MALSGSTYTAFARHRLVLEWRASQNVAGNYSDVSIWLYLQSMDSYGALYAPAVGQAQVTANGVKQTENATSQLNAYQKKLLLAKVWRVNHNADGSKSFSISASYFVNVTYSGVYYGTISIPSFSVSLNKIPRKSSLNPVPDLNIPNKLGVSITRQSSSFTHNLTVWVANRTNPTLDNDSHWVYLNSIENVGTSGTLTFSVANFTEMFKRMGTSTEWVGKVKLWTNGLSESVPSQQRTFRIKPPMNAQASGGKLKVKAGEKITVSLSNFQSDGNFKYTGVFDYRGVSIPVATNVHANSMTLTLTQANVDSILKESPDDAGTWGQVRVTSYYNGVQYRTPWTGQHIDCTIPKEDYLPVINGTPTYTDLSAEATNVTGSNQVALQSKSNIRVTIPANFATGQGFSTIKTVQASLGGATKTANYNASGFNIDIGAPNEGTASSLVVTVLDGRGFSTSWTKTVQVYPYSNPDVNYTIARRNNFEVDTELAVSSSWAPVTIGGVNKNAITSVTYATKRSGTSTWGEETPVTFSTDGAKVIVPTTVVQLPNEYSWNFRLTIKDKFGSFSKEANISAGKPIMFIDAVRESVGFGNLTGTGENRNLNGVIEIEAERYHTTGKTGIQMNNSDISGLNGIYFSNDVMDNDGEGLHFIKSGKDVNSSNKKDYDYMYMRDGGFYVNHDGTPIFKVTDNGRMYYPASHLWSGGWYMSGTQNITPSKPMSECRNGWVLMWAKYQNSTQTWNDVVQVYLGKDLVTTHSGLGVRLLFGGYGNVVIHKYLTITDTEVRGNASNTNASLNADRAILVRVHEW
Physico‐chemical
properties
protein length:803 AA
molecular weight: 87930,13160 Da
isoelectric point:8,93308
aromaticity:0,10461
hydropathy:-0,33450

Domains

Domains [InterPro]
DC_1676
ATT
4–122
DC_1676 DC_0631 IPR008577
IPR008577
STR
21–172
IPR008577 DC_1167
QDB71534.1
1 803
Architecture
ATT
STR
STR
ATT 4-122 | STR 123-253 | STR 256-803
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QDB71534.1
1 803
Domain Start End Length (AA) Confidence
N-terminal 1 132 132 0,0009
Central domain 133 388 257 0,8059
C-terminal 389 803 414 0,5217
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-132
Central
133-388
C-terminal
389-803

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterococcus phage vB_OCPT_Ben
[NCBI] 		2587819 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Enterococcus faecalis EnGen0211
[NCBI] 		1157397 Bacillota > Bacilli > Lactobacillales > Enterococcaceae > Enterococcus > Enterococcus faecalis

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QDB71534.1 [NCBI]
Genbank nucleotide accession
MN027503 [NCBI]
CDS location
range 58858 -> 61269
strand -
CDS
ATGGCTTTAAGCGGTAGTACATACACAGCTTTTGCACGGCATAGGCTTGTGTTAGAATGGAGAGCCTCCCAGAATGTTGCGGGCAACTACTCTGATGTAAGTATTTGGTTATACTTGCAGTCTATGGATTCCTATGGTGCTTTATATGCTCCTGCTGTTGGACAAGCACAGGTAACAGCTAATGGAGTTAAGCAAACCGAAAATGCAACATCACAATTGAATGCTTATCAGAAAAAACTATTGCTAGCCAAAGTTTGGCGTGTAAATCATAACGCAGATGGTAGCAAGTCTTTTTCTATATCTGCTAGTTACTTTGTAAACGTAACCTATTCAGGTGTTTACTACGGAACAATCTCGATACCGTCATTCTCGGTTTCATTAAATAAAATTCCACGTAAAAGTTCGTTAAACCCTGTGCCAGATTTAAATATTCCTAATAAACTAGGGGTAAGTATTACCCGACAAAGTTCTAGTTTTACACATAATTTAACTGTTTGGGTAGCCAATAGAACAAACCCTACATTAGATAATGACTCCCATTGGGTGTATTTAAACAGTATTGAGAACGTAGGTACAAGTGGTACATTAACATTTAGTGTAGCAAACTTCACAGAAATGTTCAAGAGGATGGGTACAAGTACCGAATGGGTAGGCAAGGTGAAGCTCTGGACGAATGGTTTAAGCGAGTCAGTGCCGAGCCAACAACGAACCTTCCGAATAAAACCTCCAATGAACGCACAGGCTTCTGGGGGTAAGTTAAAAGTAAAAGCAGGAGAAAAGATTACTGTTAGTCTAAGTAACTTCCAATCTGACGGTAACTTTAAATATACAGGTGTTTTTGATTATCGAGGGGTATCCATACCAGTAGCAACAAATGTACATGCAAACTCTATGACTCTTACATTAACCCAAGCAAACGTGGATTCTATCTTGAAAGAATCTCCGGATGATGCAGGAACATGGGGGCAAGTACGAGTAACAAGTTACTACAATGGTGTACAATATCGAACTCCTTGGACTGGACAGCATATTGATTGTACCATTCCTAAAGAAGATTACTTACCTGTAATAAACGGAACACCGACTTATACTGACTTAAGTGCCGAAGCTACTAACGTTACCGGAAGTAACCAAGTAGCATTACAAAGTAAGTCTAATATCCGTGTGACTATTCCGGCTAACTTTGCCACAGGTCAAGGATTCTCAACAATTAAAACCGTGCAAGCTTCATTAGGTGGGGCTACAAAAACTGCTAACTATAATGCTTCTGGTTTTAACATTGATATTGGTGCTCCAAATGAAGGTACTGCTTCTTCATTAGTTGTTACTGTTCTAGACGGTCGAGGATTTAGTACATCTTGGACAAAAACAGTTCAAGTATATCCATATAGCAATCCAGATGTTAACTATACGATTGCCCGTAGAAACAACTTTGAAGTAGATACAGAATTAGCTGTTTCAAGTAGTTGGGCGCCTGTTACTATCGGTGGTGTAAACAAAAATGCAATTACGTCAGTAACCTACGCAACTAAACGTTCAGGTACAAGTACATGGGGAGAAGAAACACCAGTAACTTTCTCCACAGATGGGGCTAAAGTTATTGTCCCAACAACCGTTGTTCAGTTACCTAATGAGTACAGTTGGAATTTCAGACTAACTATCAAAGATAAGTTTGGTAGCTTCTCTAAAGAAGCAAATATTTCTGCCGGAAAACCTATTATGTTTATTGATGCTGTTCGTGAATCTGTAGGTTTTGGTAACCTGACAGGTACAGGAGAAAATAGAAACCTTAATGGTGTAATTGAAATTGAGGCGGAACGCTACCATACTACAGGTAAAACTGGTATCCAAATGAATAACAGTGATATTTCTGGTTTGAATGGAATATATTTCTCAAATGACGTAATGGATAACGATGGTGAAGGATTGCATTTTATCAAGTCAGGGAAAGACGTTAACTCTTCCAATAAAAAAGACTACGATTATATGTATATGAGAGACGGCGGATTCTATGTTAACCATGATGGTACTCCAATCTTTAAAGTTACTGATAACGGTCGTATGTATTATCCTGCCTCTCATTTGTGGTCTGGTGGTTGGTATATGTCTGGTACACAAAATATAACCCCATCGAAACCAATGTCAGAGTGTAGAAATGGATGGGTACTCATGTGGGCTAAGTATCAAAATAGCACACAGACATGGAATGATGTTGTACAGGTATATTTAGGTAAGGACTTAGTAACAACACATAGTGGACTAGGTGTAAGATTACTATTTGGTGGTTATGGTAACGTTGTTATCCATAAATATTTAACGATTACTGATACAGAGGTTAGAGGTAATGCTTCAAACACCAATGCTAGTTTAAACGCTGACAGAGCTATTTTAGTTCGTGTTCACGAATGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ff38e99c9532012f377fe9fba4cf856c5beb40c388cde1de1d876c1441bebd34
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3374
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50