Protein

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Genbank accession
YP_010669938.1 [GenBank]
Protein name
short tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MSILRADGLRFGNGTELTSFYGIVPQSSTMVFYQASAPTGWTKSTTHDNKALRVVDGTGAGSGGLISFTDIFNDSTGAEADLSATLSGSVGGHTLTEAEIPAHTHNTGSNPNSYRSSAGSSPFRTDNRQPRGYNIRAITRTVQNNRVIVNFRQPVNVRQPRNYRQPRRQRVPLRQRQPRNFRVRYPTRSRAPFNFRAPVPFRVPLRSRAPFNFRADVGRSRRPIPFSFRASIRNNDRFPRRRGGRRRRNDREPRRADRRQPRNSGWRQRRQLRQPRSARQRRSFRQPRNFRQPRAARQRRSFRVRQPRTFRVRYSFRQRNSYRVNIPFRAVVPQRNPASYRQPRSYRVPQRYPQTSSVRVSQRVLTPGGTIRANNTQAPATSPSGGGQSHNHPFTGSPISWVASLSPLRVQYIDVILCSLD
Physico‐chemical
properties
protein length:421 AA
molecular weight: 48445,80840 Da
isoelectric point:11,99997
aromaticity:0,09026
hydropathy:-1,01591

Domains

Domains [InterPro]
DC_0294
STR
5–181
DC_0294
YP_010669938.1
1 421
Architecture
STR
STR 5-181 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-SCSM1
[NCBI] 		2588487 Uroviricota > Caudoviricetes > Pantevenvirales > Zhoulongquanvirus > Zhoulongquanvirus esscess
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010669938.1 [NCBI]
Genbank nucleotide accession
NC_070962.1 [NCBI]
CDS location
range 213879 -> 215144
strand +
CDS
ATGTCAATTTTAAGAGCAGACGGACTTAGATTTGGTAATGGAACTGAATTAACAAGTTTTTATGGAATTGTTCCACAATCTTCCACGATGGTGTTTTATCAAGCATCAGCACCAACTGGGTGGACTAAATCTACAACACATGATAATAAAGCGCTTAGAGTTGTAGATGGAACTGGTGCAGGATCTGGTGGTTTAATTTCCTTCACAGATATATTCAATGATTCTACAGGTGCAGAAGCAGATCTTTCAGCAACACTTTCAGGTTCTGTAGGTGGTCATACTTTAACGGAAGCAGAGATTCCTGCACATACTCATAACACTGGAAGTAATCCTAATTCATATAGATCTTCTGCTGGTTCTTCACCATTCAGAACCGATAACAGACAACCACGTGGATATAATATCAGAGCAATAACAAGAACTGTTCAAAACAATAGGGTTATTGTTAATTTTAGACAACCAGTTAATGTAAGACAACCTCGTAACTATAGGCAACCAAGAAGACAGAGAGTTCCACTCAGACAGAGACAACCTAGGAACTTTAGGGTTAGGTATCCTACACGTTCTAGAGCACCATTTAACTTCCGTGCTCCTGTTCCTTTCCGTGTTCCATTAAGATCTAGAGCACCATTTAACTTCCGTGCTGATGTAGGAAGAAGTAGAAGACCAATTCCTTTCTCTTTCCGTGCATCTATTAGAAATAATGATAGATTCCCAAGAAGAAGAGGTGGAAGACGTAGGAGAAACGATAGAGAACCAAGAAGAGCAGATAGAAGACAACCAAGAAACTCTGGTTGGAGACAAAGAAGACAACTTAGACAACCTAGATCTGCTAGACAGAGAAGGTCATTCCGTCAACCTCGTAACTTCAGACAACCTAGAGCAGCAAGACAGAGGAGATCATTCAGGGTAAGACAACCAAGAACATTTAGAGTGAGATATTCATTCAGACAGAGAAATTCTTATCGTGTGAATATTCCGTTCAGAGCAGTAGTTCCACAGAGAAATCCTGCATCTTATAGACAACCAAGATCATATCGTGTACCACAAAGATACCCACAAACTAGCAGTGTGAGAGTATCGCAGAGAGTTTTAACTCCTGGTGGTACAATCAGAGCAAATAATACTCAAGCACCAGCAACATCACCAAGTGGTGGTGGTCAATCACATAATCATCCATTTACTGGATCTCCAATATCATGGGTTGCTTCATTGTCACCATTGAGAGTACAATACATCGACGTGATTCTTTGCAGTTTGGACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
ae6fe0cb2003e0ace2cecfe342f6e5ab28b3e6f9f8d6ff3092a1bba4a4cf1957
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4858
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic and proteomic characterization of cyanophage S-SCSM1 provides new insights into understanding the viral gene diversity and phage-host interactions Wang,Q., Xu,Y., Jiao,N. and Zhang,R. 2022-10-26 — GenBank