Protein

View in Explore
Genbank accession
URQ05127.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,91
Protein sequence
MPKDIQMRERVNGDSWDDMNPLTKSRNVTNEYGITEDKLNGMTPSRMDLYVSSTNGVDSPLSGSETNPFKTIQYAVDSIPKYVNNDWYIWIEDGEYDEEIRIKGFTGSALVLGRKDGIIDPYDASTGLEVTAVEVMDCTGLVRINNFTQLRANCIKKEAYIRASRCAYVTVHAIRADDPTIIMDTVQFDGSTGSVNRSFFNGQVYCIVAKNGSSVRIDSTCRHGTTQSGTGVLAQAATVSLNGTNDWTSGTSNEYATSQGGTINSQLDVLDLTPLLKNGWTAYDQNRNMPRALRHNGVVYLQGLINLGSVGQGIVAFTLPRLWTPQFNSRLYSPLCADGSNSRVLITVGGDVAVEQASGQYISLSDIPPFYVGF
Physico‐chemical
properties
protein length:374 AA
molecular weight: 40947,29650 Da
isoelectric point:4,94308
aromaticity:0,08556
hydropathy:-0,28957

Domains

Domains [InterPro]
DC_0614
ATT
3–368
DC_0614
G3DSA:3.30.1910.20
RBD
46–110
G3DSA:3.30.1910.20
IPR011050
STR
46–258
IPR011050
URQ05127.1
1 374
Architecture
ATT
ATT 3-368 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
URQ05127.1
1 374
Domain Start End Length (AA) Confidence
N-terminal 1 83 83 0,8752
Central domain 84 282 200 0,8728
C-terminal 283 374 91 0,9988
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-83
Central
84-282
C-terminal
283-374

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacillus phage Sarmo
[NCBI] 		2945893 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Bacillus safensis
[NCBI] 		561879 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
URQ05127.1 [NCBI]
Genbank nucleotide accession
ON493777.1 [NCBI]
CDS location
range 12870 -> 13994
strand +
CDS
ATGCCGAAAGATATTCAGATGAGAGAACGTGTCAATGGAGATTCATGGGATGACATGAACCCTCTCACTAAATCAAGAAACGTCACCAATGAATATGGTATTACAGAAGACAAGTTGAATGGTATGACTCCTTCAAGAATGGATTTATATGTTAGTTCTACTAATGGTGTTGACTCACCGTTGAGTGGTTCAGAAACTAACCCATTTAAAACTATCCAATATGCTGTAGACTCAATCCCTAAATACGTTAACAATGACTGGTATATCTGGATTGAAGATGGTGAGTATGATGAGGAAATCAGAATCAAGGGGTTCACTGGTTCAGCGTTAGTCCTTGGAAGAAAAGATGGGATTATTGATCCTTATGATGCTAGCACAGGTTTAGAAGTAACTGCTGTAGAAGTTATGGACTGTACTGGTCTTGTCAGAATCAACAACTTCACACAATTGAGGGCTAACTGTATTAAAAAAGAAGCTTACATTCGTGCTTCTAGATGTGCTTATGTGACTGTTCACGCTATCAGAGCAGATGATCCTACAATCATTATGGACACAGTACAATTTGATGGTTCAACAGGATCAGTTAACAGATCATTCTTTAATGGCCAAGTATATTGTATTGTAGCTAAAAACGGGTCATCAGTTCGTATTGACTCAACATGCCGACACGGTACTACACAATCAGGAACAGGGGTTTTAGCACAAGCGGCTACTGTCAGTCTTAACGGAACAAACGATTGGACTTCTGGAACAAGCAACGAATACGCAACAAGCCAAGGGGGAACAATCAACAGCCAGTTAGACGTTCTTGATCTAACACCACTCCTTAAGAATGGTTGGACGGCTTACGACCAAAATAGAAACATGCCGAGAGCTTTACGTCATAACGGGGTTGTTTATTTACAAGGGTTGATTAACCTTGGTTCAGTCGGACAAGGTATAGTAGCTTTCACATTACCAAGATTATGGACTCCTCAATTTAACTCACGATTATATTCACCATTGTGTGCAGATGGTTCTAATTCTAGAGTTCTAATAACAGTTGGCGGGGATGTTGCTGTAGAACAGGCTAGTGGGCAGTATATTTCACTTAGTGATATCCCTCCTTTCTATGTAGGTTTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
143086d476f488ec622bdfb6d2b0248c9e6b1840bb9b3dd87eb3860ef90f3c72
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8111
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacterial viruses and bacteria inside Xanthoria parietina lichen Petrzik,K. and Moravcova,S. 2010-01-01 — GenBank