Protein

View in Explore
Genbank accession
WYA89425.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MQSTGRPTKFLVPFANNDSAKVELPLTTADATRASLRTGFPPLTGQPPEAGGVPPQLEDMNGGLNQMSRGAWWPMLGGRWPYDATFAADAAINGYPQGALLPSADGLGNWVSTAENNTANPDADSTGWVPGAFYGATALTNQTGGTVTLVPAQAGKRRITVSGTLTSNLVIVVPNWIYSWDFINTTSGAFSMVVRTATGAAAVVEQNGERTPVFCDGTNCTLGSPNIAQATRPTQAIRFDQAVGRLLNVQRFTASGTYTPTPGTARIVVEIVGGGGAGGGAQSNNTAASVGCGGGGGAFVKAMLTSVPSSVTVTIGAGGASANAQGGTGGTTSFGAFASAQGGTGGRSLGADNSIPNFGAEGGPGGDTAAAGGGAILLVASAGASGGAATSLGAGAYLTAGMGGPTYFGGTAKTANTTAGASAKANTGCGGSGTTAASGAVTINQGGAGGSGLCLVWEYA
Physico‐chemical
properties
protein length:460 AA
molecular weight: 44837,07100 Da
isoelectric point:5,56439
aromaticity:0,06739
hydropathy:0,01870

Domains

Domains [InterPro]
DC_1179
STR
1–458
DC_1179
IPR049304
STR
254–456
IPR049304
WYA89425.1
1 460
Architecture
STR
STR 1-458 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage XapPhi5
[NCBI] 		3125923 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Xanthomonas arboricola pv. pruni
[NCBI] 		69929 Pseudomonadota > Gammaproteobacteria > Lysobacterales > Lysobacteraceae > Xanthomonas > Xanthomonas arboricola

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WYA89425.1 [NCBI]
Genbank nucleotide accession
PP391663.1 [NCBI]
CDS location
range 37579 -> 38961
strand +
CDS
ATGCAATCTACCGGCCGGCCAACCAAGTTCCTTGTGCCTTTTGCCAACAACGACTCCGCGAAAGTCGAGCTGCCGCTGACGACGGCCGACGCCACGCGCGCTTCGTTGCGCACGGGTTTTCCACCACTGACCGGCCAGCCGCCCGAGGCCGGCGGCGTGCCTCCGCAGCTAGAAGACATGAACGGCGGACTCAACCAGATGAGCCGGGGCGCTTGGTGGCCGATGCTCGGTGGCCGGTGGCCGTATGACGCGACCTTTGCTGCGGATGCGGCGATCAACGGTTACCCCCAGGGCGCGTTGCTGCCGTCTGCAGATGGCCTGGGCAATTGGGTCAGCACCGCCGAGAACAACACCGCCAACCCTGACGCCGACAGCACCGGCTGGGTGCCAGGCGCGTTCTACGGCGCGACCGCGCTGACCAATCAGACCGGCGGCACTGTCACACTTGTGCCGGCGCAAGCCGGCAAACGCCGCATCACGGTGAGCGGCACGCTGACATCCAACTTGGTTATCGTCGTTCCGAATTGGATCTACTCGTGGGATTTCATCAACACGACGAGCGGCGCATTTTCAATGGTAGTGCGTACCGCCACCGGGGCTGCGGCAGTAGTGGAACAAAACGGCGAGCGTACGCCGGTATTTTGTGACGGCACCAATTGCACGTTGGGCAGCCCGAATATCGCCCAAGCCACACGCCCAACCCAAGCGATACGGTTCGATCAAGCTGTGGGCCGTCTGCTCAACGTACAACGCTTTACGGCGAGCGGCACGTACACGCCTACCCCCGGTACCGCTCGCATCGTGGTAGAGATTGTGGGCGGTGGCGGTGCGGGTGGCGGTGCCCAGTCCAACAACACCGCGGCGTCGGTGGGCTGCGGCGGCGGCGGCGGTGCGTTCGTCAAGGCCATGCTTACCTCCGTCCCGAGTTCGGTGACCGTCACGATCGGTGCTGGCGGCGCAAGCGCAAATGCACAAGGTGGGACCGGCGGAACGACGTCGTTCGGCGCGTTTGCCTCGGCGCAGGGGGGAACCGGTGGCCGATCGCTGGGTGCAGACAACAGCATTCCGAACTTCGGCGCCGAAGGCGGGCCGGGCGGCGACACTGCGGCGGCGGGTGGCGGCGCGATCCTGTTGGTGGCCTCCGCAGGCGCTTCGGGCGGTGCCGCAACCTCGCTCGGTGCCGGTGCTTACCTGACTGCAGGGATGGGTGGCCCCACTTATTTCGGCGGCACGGCAAAGACGGCAAACACTACGGCCGGCGCCAGTGCTAAAGCGAACACGGGGTGCGGGGGCTCCGGCACTACGGCGGCATCCGGCGCGGTGACGATCAATCAAGGCGGCGCCGGTGGTTCCGGTTTGTGCTTGGTATGGGAGTACGCTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
6dd62428929e65ee012c70f6c0e1f2cc16a6a83c2374d1231c07035e934fae06
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8973
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genetically similar Xanthomonas arboricola pv. pruni strains and associated phage display phenotypic and genotypic variation across 35 years D'Amico-Willman,K.M., Ritchie,D.F., Smith,A.M. and Huerta,A.I. 2025-03 — GenBank