Protein

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Genbank accession
QOI66462.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MVAKNIMASFGQGFVQTQIMAENNAVKYKLSFAGSNKNSTAFSYCQINDKDIGSTSFGVGLNTKLINLSNNSVVDEKYFDFKNSSGSSQAFINYVAGLQSGLILVMFSNSELGSDTNIDNWFNSVGSVAWPNTSKLQKFPTTSYAAIYLTGEKLICKEACIINDGIYREDSRAFIDTVYDKIEDLGATGYPYRFINDPNTYSSSSDYELKRYPDDSLTTPIKNAGVGDKFMIFSADLFADNQLISDGMTTRIVLRWLNDNNVISSTTLETSTFEADRWITKGTRVVIPATANNFTVVANRYPQGSTSTGVGSVRNVFLARISKQFENLDRPSEIGVNGIRMNQFIDDSSSFILELVDTNTDSTGTVYGTEFKEFSR
Physico‐chemical
properties
protein length:376 AA
molecular weight: 41558,82120 Da
isoelectric point:4,84083
aromaticity:0,11436
hydropathy:-0,25532

Domains

Domains [InterPro]
DC_0912
STR
1–376
DC_0912
PS52031
LEC
24–194
PS52031
IPR039477
STR
60–134
IPR039477
QOI66462.1
1 376
Architecture
STR
STR 1-376
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QOI66462.1
1 376
Domain Start End Length (AA) Confidence
N-terminal 1 177 177 0,3289
Central domain 178 365 189 0,3096
C-terminal 366 376 10 0,7309
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-177
Central
178-365
C-terminal
366-376

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage FBB1
[NCBI] 		2776772 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Erwinia tracheiphila
[NCBI] 		65700 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QOI66462.1 [NCBI]
Genbank nucleotide accession
MT920315 [NCBI]
CDS location
range 52593 -> 53723
strand +
CDS
ATGGTAGCTAAAAACATTATGGCGAGTTTTGGACAGGGATTTGTCCAAACTCAAATAATGGCTGAGAACAATGCTGTAAAATATAAATTGAGCTTTGCTGGCTCTAATAAAAATTCTACAGCATTTTCTTATTGCCAGATAAATGATAAGGACATTGGTTCTACCTCATTTGGGGTAGGACTTAATACAAAGCTTATTAATCTCTCTAATAATTCTGTGGTTGATGAAAAATATTTTGATTTTAAAAATTCAAGTGGTTCATCACAAGCATTTATAAATTATGTGGCTGGGTTACAAAGTGGTTTAATTCTTGTCATGTTTTCCAACTCCGAATTGGGAAGTGACACTAACATCGATAATTGGTTTAATAGTGTAGGATCAGTAGCATGGCCTAATACTTCAAAGCTTCAAAAATTTCCTACGACAAGTTATGCGGCAATTTATTTAACTGGCGAAAAGCTTATATGCAAAGAAGCTTGTATAATAAATGATGGGATTTATAGAGAGGATTCCAGAGCATTTATCGATACAGTGTATGACAAAATAGAGGATCTAGGAGCAACCGGGTATCCCTATAGATTCATTAATGACCCTAATACTTATTCAAGCTCAAGTGATTATGAATTGAAAAGATACCCCGACGATTCATTAACTACTCCTATAAAAAATGCTGGTGTAGGAGATAAATTTATGATTTTTTCTGCAGACCTTTTTGCTGATAATCAACTTATCTCGGATGGTATGACAACTAGAATTGTACTTCGTTGGCTAAATGACAATAATGTTATATCAAGCACCACTTTGGAAACATCTACATTTGAAGCGGATAGGTGGATTACCAAGGGAACTAGGGTGGTTATTCCTGCTACAGCAAATAACTTTACAGTTGTAGCGAATAGATATCCTCAAGGCTCTACTTCTACAGGAGTAGGATCGGTAAGAAACGTTTTTCTTGCTAGGATTTCTAAACAATTTGAAAATCTGGATAGACCTTCGGAAATTGGCGTTAATGGTATAAGAATGAACCAGTTTATTGATGATTCATCTAGCTTTATACTCGAACTTGTTGACACCAATACAGATTCAACTGGTACTGTCTACGGAACAGAGTTTAAGGAATTTTCCAGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
71546a64b02f60718311f1502d2f3e0b2a20151db440e94a64595acbb9bddfa2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6821
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of Erwinia tracheiphila lytic bacteriophage FBB1 isolated from the disease transmitter spotted cucumber beetle Fu,B. and Beattie,G.A. 2021-12 — GenBank