Protein

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Genbank accession
QQM13698.1 [GenBank]
Protein name
non-contractile tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MANKISTVRTYPLNGAVNFTITFEYLARKFVQVTLIGKDRKELVLNQDYRFTTKTQITTSRAWTAADGYQMIEIRRLTSATDRLVDFADGSILRAYDLNISQIQTLHVAEEARDLTADTIGVNNDGHLDARGRKIVNLAYATSDYDAVPLKQIKERETSVWNAVTKADEHANRSNKEANRSRDEADRAKREADRSTQQAGVSTSQAVESKKQADRSTSEANRAKGYADSMTASVEAAKGHADRSNNEANRARDEANRAAGEVTKAAAEVAKAAAHVATAKGHADRSNTEANRSKSEADRAKTEADKLGNMNDFAGTVESIGSNGKDVNFKGGVNGHTILAKDSVHAGVQPNTAFFNDNTLRLRNRDHKERAWDIFVWGNDSGRGNVLEFGTNYGKGYGMYLQFAKGDSQDSQLQVNGAIAAKTDISGRGITANGVLITRSQNLKLINSARRHIQFMTNDTYTDGYLYKDPGAGAWKFNFGQATATEYTFASNGHFTSSSGWNIPPDGNLYIKKYNTYIDAWVNKRLSEHAYNKSETNNLVNGRLTDGQGDGRYIRKNAGWAEVWKGSARGGVSVGLNQDVRWRTIWIQTQGRWNPVEIGDNGAYYISSMGGWLTFTISNNGRTFRNDGDRASVPTRILVRNN
Physico‐chemical
properties
protein length:642 AA
molecular weight: 70843,18980 Da
isoelectric point:9,40176
aromaticity:0,08411
hydropathy:-0,73255

Domains

Domains [InterPro]
IPR005604
ATT
1–130
IPR005604 Coil Coil Coil G3DSA:2.60.320.30
DC_0778
STR
1–641
DC_0778
QQM13698.1
1 642
Architecture
ATT
STR
ATT 1-130 | STR 131-641 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QQM13698.1
1 642
Domain Start End Length (AA) Confidence
N-terminal 1 218 218 0,9353
Central domain 219 431 214 0,5055
C-terminal 432 642 210 0,8975
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-218
Central
219-431
C-terminal
432-642

Taxonomy

  Name Taxonomy ID Lineage
Phage Yersinia phage PYps50T
[NCBI] 		2764920 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Yersinia pseudotuberculosis
[NCBI] 		633 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QQM13698.1 [NCBI]
Genbank nucleotide accession
MT515757.1 [NCBI]
CDS location
range 4437 -> 6365
strand -
CDS
ATGGCTAATAAAATTTCCACTGTACGTACTTACCCGCTGAACGGTGCCGTGAACTTCACGATTACCTTTGAGTATTTAGCACGTAAGTTCGTCCAAGTGACACTCATCGGGAAAGACCGTAAAGAGTTGGTTCTTAATCAGGACTATCGCTTTACCACTAAGACCCAAATCACAACCTCCCGTGCGTGGACTGCCGCCGATGGTTATCAGATGATTGAGATTCGTCGACTCACCTCCGCAACCGACCGTCTGGTTGACTTTGCTGATGGCTCAATCCTTCGTGCATATGACCTTAACATCTCACAGATTCAGACGCTGCATGTAGCTGAAGAGGCACGAGACCTAACTGCGGATACCATTGGTGTCAACAATGATGGTCACTTGGATGCCCGTGGTCGTAAGATTGTGAACCTAGCATACGCCACCAGCGACTATGATGCTGTCCCCCTGAAGCAGATTAAGGAACGTGAGACCTCTGTGTGGAACGCTGTGACCAAAGCTGACGAACACGCTAACCGTTCTAACAAGGAAGCTAACCGCTCACGCGACGAAGCTGACCGTGCTAAACGTGAAGCTGACCGCTCGACCCAACAGGCAGGTGTTTCTACGTCACAGGCAGTTGAGTCCAAGAAGCAAGCTGACCGCTCCACCTCTGAGGCCAACCGTGCTAAAGGTTATGCTGATAGTATGACAGCCAGTGTTGAAGCTGCAAAGGGTCACGCTGACCGTTCCAATAATGAGGCTAACCGTGCTCGTGATGAGGCTAACCGTGCTGCTGGTGAAGTCACTAAGGCCGCTGCTGAGGTTGCCAAAGCTGCTGCACACGTTGCTACCGCTAAGGGACACGCTGACCGTTCTAACACTGAGGCTAACCGCTCTAAGAGTGAAGCTGATCGTGCTAAGACTGAGGCCGATAAGTTAGGCAACATGAATGACTTCGCGGGAACCGTTGAGAGCATTGGGAGTAACGGTAAGGATGTGAACTTCAAGGGTGGCGTTAATGGTCACACAATTCTTGCTAAGGATTCTGTACACGCTGGGGTTCAACCAAACACTGCGTTCTTCAATGATAACACACTACGTCTTCGCAACCGTGACCACAAGGAACGTGCTTGGGACATCTTTGTTTGGGGTAATGATTCTGGACGTGGTAACGTACTGGAGTTCGGAACTAACTACGGTAAAGGGTATGGGATGTACTTGCAGTTTGCTAAGGGTGACTCACAAGATTCCCAACTTCAGGTTAATGGTGCGATTGCAGCTAAGACAGATATTTCTGGACGGGGCATCACAGCAAATGGGGTATTAATTACCCGCTCACAAAACCTTAAGCTGATTAACTCTGCTCGTCGCCACATCCAGTTCATGACAAATGATACCTACACCGATGGTTATCTTTACAAAGACCCCGGCGCTGGGGCGTGGAAGTTCAACTTTGGGCAAGCAACTGCCACGGAGTACACGTTTGCTTCAAATGGGCACTTCACATCTAGCTCCGGGTGGAACATCCCACCAGATGGTAACTTGTATATCAAGAAGTATAACACGTACATTGATGCGTGGGTTAACAAGCGCCTAAGTGAACATGCCTATAACAAGTCTGAAACTAACAACTTGGTCAATGGTCGCCTTACTGATGGTCAGGGTGATGGTCGCTACATCCGCAAGAACGCTGGGTGGGCTGAGGTATGGAAAGGCTCTGCTAGGGGTGGTGTTTCCGTAGGTCTCAATCAGGATGTCCGCTGGAGAACTATCTGGATTCAAACTCAAGGACGGTGGAACCCGGTCGAGATTGGTGATAATGGTGCTTACTACATCTCTTCAATGGGTGGGTGGTTGACCTTCACAATCTCCAACAACGGTCGTACATTCAGGAACGATGGTGACAGGGCTTCTGTGCCTACTCGTATTCTGGTTCGAAACAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b6de1f620a582af8f0bbc51b2c1140651ba323582d3da4e0f7fa964148a247fb
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7149
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome sequence of Yersinia pseudotuberculosis phages Hammerl,J.A. 2018-05-10 — GenBank