Protein

View in Explore
Genbank accession
UJD06011.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,86
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MTNIKARKGGSSQPRTPVEMPDNLISKDKIKLLLAVSDGEVVDDFSLKQLHFGGVPVQNEDGSYNYEGVIAEFRPGTQTQSYIQGFSESSAEFQVARDVTFNTPYTLTVSNKNLSAIRFRLLWPRVLTQKDNGDMVGSVVEYKIEMAVDGASYQTYLTDKIDGKNTTGGYDRSIRVNLPQDFTSQVLIRVSRITPDADGVKVVDAFQVQSYAEVIDAKFRYPLTAMLYVEFDSDLFQNQIPTISLKKKWKIIQVPSNYDPINRTYSGTWNGTFKWAWSNNPAWVLYDLIMNQRYGLDQRELGIPVDKWSLYEVSQYCDELVPDNRGGMEPRYLMDMIVQSQVEAFQLVRDVCSAFRGMTFYNGESLSIIVDKPRDPVYLFTADNVVDGVFVRTFPSEKTMYTSCNVMFDDEENQYEQDVEPVFNPDAAMRFGHNPTSITAIGCTRRTEANRRGRWILQTNLSATTVSFSTGLEGMIPSCGDVIYVADPHWQSAFNLVLSGRIMEVTGTQVFLAFRCDAKAGDTLILNTDDGKPLRRTIASVSADGKTLTLNVGYNFDVAPDSVFLIESDQLAAEQYVVTRIEKGSDDDEFTFAITATQYNPNKYDAIDNGVITDDRPTSVVDPDSMGAPENVSISSFSRIVQGMSVETMVIGWSAVQYAKLYEVQWRKDGGNWNNVPRTATTQVDIEGIYAGEYQARVRCISGGNIASPWSALASASLTGKIGAPKGPINLFASDNEIFGIRVKWAMPEGAEDTAYIELYQSQSGTDQDASLLTLIPYPAAEYWHSILPAGYVNWYKARSVDRIGNVSPWTDYARGMSSTDVSIITDQILDEILDSDAMKELQESAQDSASKLNDYANSIIQNALANDADVRVMRKENGKRKAEISHATVLIANETEARAAEITQLKTQIDEDITSQITILNEALADESETRATQINQLQTQFGEDMEAGFTQVNEAIANESEARATSEAALDAKIGENSAALAQKLDSWANVDGVGSMYTMKLGLTYNGQEYNSGMALQLTAQGNNVVSQVLFIADRFAIIRNAASGAYTLPFVVQNDQVFMNNALIQDGSITNAKIGNVIQSNNFQENVAGWQLNKNGVFVNYGSTSGEGSIKQTNQNITVRDGNNRVRCQLGRITGVW
Physico‐chemical
properties
protein length:1141 AA
molecular weight: 126368,73530 Da
isoelectric point:4,63627
aromaticity:0,09202
hydropathy:-0,31762

Domains

Domains [InterPro]
DC_0014
STR
1–1141
DC_0014
IPR053171
Unmapped
3–867
IPR053171 IPR015406
IPR055385
ATT
90–217
IPR055385 IPR032876 IPR013783
IPR036116
STR
627–713
IPR036116
UJD06011.1
1 1141
Architecture
STR
ATT
STR
ATT
STR
STR 1-89 | ATT 90-217 | STR 218-340 | ATT 341-489 | STR 490-1141
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UJD06011.1
1 1141
Domain Start End Length (AA) Confidence
N-terminal 1 501 501 0,9041
Central domain 502 1083 583 0,0587
C-terminal 1084 1141 57 0,6089
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-501
Central
502-1083
C-terminal
1084-1141

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage PWKp19
[NCBI] 		2863269 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UJD06011.1 [NCBI]
Genbank nucleotide accession
MZ634350.1 [NCBI]
CDS location
range 1649 -> 5074
strand -
CDS
ATGACTAATATCAAGGCCCGCAAGGGCGGTTCCAGCCAGCCGCGCACCCCGGTAGAAATGCCTGATAACCTGATCTCGAAAGACAAGATCAAGTTATTGCTGGCCGTTTCTGACGGTGAAGTAGTGGATGACTTCAGCCTGAAGCAGTTGCATTTCGGCGGCGTTCCGGTTCAGAACGAAGACGGGAGCTATAACTATGAGGGAGTTATTGCAGAATTTCGCCCCGGCACGCAAACGCAGAGTTACATCCAGGGATTCAGTGAATCAAGCGCTGAATTCCAGGTTGCACGCGACGTTACCTTTAACACGCCGTACACGCTGACGGTATCGAACAAGAATCTTTCTGCTATCCGCTTCCGCCTGTTATGGCCCCGCGTGCTGACGCAAAAAGATAATGGCGATATGGTCGGTTCGGTCGTTGAGTACAAGATCGAAATGGCGGTTGACGGTGCGAGCTATCAAACCTACTTGACCGACAAAATCGACGGTAAAAACACGACTGGCGGTTACGATCGCAGCATCCGCGTCAACTTGCCGCAAGACTTCACGTCGCAGGTTCTTATCCGCGTAAGCCGAATTACGCCGGACGCTGACGGGGTGAAGGTGGTCGATGCCTTCCAGGTTCAGTCCTACGCTGAGGTGATCGATGCAAAATTCCGCTATCCGCTGACGGCAATGCTTTACGTCGAGTTTGATAGCGATCTGTTCCAGAACCAGATCCCGACAATCTCGCTCAAGAAGAAGTGGAAAATTATTCAGGTTCCAAGTAACTACGACCCAATTAACCGGACATACTCCGGAACGTGGAACGGAACTTTTAAATGGGCGTGGAGCAACAACCCGGCCTGGGTTCTTTACGACCTGATCATGAATCAGCGTTATGGGTTAGACCAGCGCGAGTTAGGAATCCCGGTAGACAAGTGGTCTCTCTATGAGGTGTCGCAATACTGTGATGAGCTTGTGCCGGACAATCGCGGAGGGATGGAGCCGCGTTACCTGATGGATATGATCGTGCAGTCGCAGGTCGAGGCGTTCCAGTTAGTAAGGGATGTTTGTTCCGCGTTCCGTGGAATGACGTTCTACAACGGTGAAAGCCTTTCGATTATCGTCGATAAACCACGCGATCCGGTTTACCTGTTCACTGCTGATAACGTCGTTGACGGCGTATTCGTGCGAACATTTCCGAGCGAAAAAACGATGTACACATCGTGCAACGTGATGTTCGACGACGAAGAAAACCAGTACGAGCAGGACGTTGAACCAGTGTTTAACCCTGACGCTGCCATGCGGTTCGGTCACAACCCGACAAGCATCACAGCGATCGGTTGCACCAGACGGACAGAAGCTAACCGCCGCGGGCGCTGGATTCTGCAAACGAACCTAAGCGCAACCACCGTTTCGTTTTCTACTGGTCTGGAAGGTATGATCCCTTCGTGCGGCGATGTTATTTACGTTGCAGATCCGCATTGGCAATCGGCCTTTAACCTGGTGCTTTCGGGGCGAATCATGGAAGTAACGGGAACGCAGGTTTTCCTGGCTTTCCGCTGCGACGCGAAGGCTGGCGATACTCTGATCCTGAACACTGACGACGGTAAGCCATTGCGCCGAACCATTGCCAGCGTATCAGCAGACGGAAAAACCCTGACGCTAAACGTGGGATATAACTTCGACGTTGCGCCGGACAGCGTATTCCTGATCGAAAGTGACCAACTGGCGGCTGAACAGTACGTTGTTACCAGGATTGAGAAGGGGAGCGATGACGACGAATTTACTTTCGCCATTACAGCCACCCAATACAACCCGAACAAGTACGACGCGATCGACAACGGCGTAATCACTGACGACCGCCCAACGTCGGTTGTTGACCCGGATTCAATGGGAGCGCCGGAAAACGTGTCGATTAGTTCATTCTCACGCATTGTGCAGGGGATGAGCGTCGAGACGATGGTAATCGGCTGGTCTGCCGTGCAGTACGCAAAACTTTACGAGGTGCAATGGCGTAAGGATGGCGGAAACTGGAACAACGTGCCGCGCACTGCGACAACGCAGGTTGACATTGAAGGGATTTATGCTGGCGAATACCAGGCGCGCGTAAGGTGCATTAGCGGCGGCAATATCGCGTCTCCGTGGTCTGCTTTGGCTAGTGCATCGCTGACCGGGAAAATTGGAGCGCCGAAAGGGCCAATTAACCTTTTCGCGTCGGATAATGAAATCTTTGGGATTCGCGTTAAGTGGGCCATGCCTGAAGGTGCAGAGGATACGGCATACATTGAGCTTTACCAGTCGCAAAGCGGAACCGATCAGGATGCAAGCCTGCTTACTCTGATTCCTTATCCGGCGGCTGAATACTGGCACTCAATTTTGCCCGCTGGCTATGTGAACTGGTACAAGGCGCGAAGTGTCGACAGGATCGGCAACGTTTCACCCTGGACCGATTACGCTCGCGGTATGTCATCGACTGACGTTAGCATTATCACAGATCAGATCCTGGATGAAATTCTGGATAGCGACGCCATGAAGGAATTGCAGGAGAGCGCACAGGACAGCGCGTCTAAACTCAACGACTACGCGAACAGCATCATTCAGAACGCGTTAGCCAACGATGCAGACGTCAGAGTTATGCGCAAGGAGAATGGCAAGCGGAAGGCTGAAATCTCGCATGCCACTGTGCTGATCGCTAACGAGACTGAAGCGAGGGCGGCTGAGATCACACAGCTTAAAACGCAGATTGATGAGGATATCACGTCACAGATTACGATCCTGAACGAAGCGCTGGCAGATGAAAGCGAAACGCGAGCAACCCAAATTAACCAGTTGCAAACACAATTTGGGGAGGATATGGAAGCAGGGTTTACGCAGGTTAACGAGGCGATCGCAAACGAAAGTGAAGCGCGCGCAACGTCCGAGGCAGCGTTAGATGCCAAAATCGGCGAGAACTCCGCAGCGCTGGCGCAAAAGCTGGATTCGTGGGCCAATGTTGATGGCGTAGGTTCCATGTACACAATGAAGTTAGGGCTAACGTACAACGGACAGGAATATAATTCCGGGATGGCGTTACAGCTTACCGCACAAGGAAACAACGTTGTTTCGCAAGTGCTGTTTATTGCCGATAGATTTGCTATCATCCGCAATGCGGCATCCGGCGCTTACACGCTTCCGTTTGTTGTGCAGAATGACCAAGTGTTCATGAATAACGCGCTTATTCAGGATGGCTCAATCACTAACGCGAAGATCGGTAACGTCATTCAGTCCAACAACTTTCAAGAGAACGTTGCTGGCTGGCAGCTTAATAAAAATGGCGTCTTTGTAAACTATGGCTCAACTTCTGGCGAGGGTTCCATCAAACAAACTAACCAGAACATTACGGTTAGAGATGGTAACAACCGCGTTCGTTGTCAGTTAGGGAGAATCACTGGAGTATGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
03fa3e8ecf165a74d40886a6b280821fb505820350c75ca796b170cbba791868
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2998
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Lytic Bacteriophages against Mutidrug-Resistant Klebsiella pneumoniae: Development of an Effective Phage-based Approach to Combat Multidrug Resistance Martins,W.M.B.S., Cino,J., Li,M., Lenzi,M.H., Sands,K., Portal,E., Mathias,J., Hansan,B., Dantas,P., Migliavacca,R., Hunter,J.R., Medeiros,E.A., Gales,A.C. and Toleman,M.A. 2021 — GenBank