Protein

View in Explore
Genbank accession
WWY65775.1 [GenBank]
Protein name
tail collar fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MSNNTYQHVSNESKYVKFDPVGSNFPDTVTTVQSALSKISNIGVNGIPDATMEVKGIAMIASEQEVLDGTNNSKIVTPATLATRLLYPNATETKYGLTRYSTNEETLEGSDNNSSITPQKLKYHTDDVFQNRYSSESSNGVIKISSTPAALAGVDDTTAMTPLKTQKLAIKLISQIAPSEDTATESVRGVVQLSTVAQTRQGTLREGYAISPYTFMNSVATQEYKGVIRLGTQAEINSNLGDVAVTGETLNGRGATGSMRGVVKLTTQAGIAPEGDGSGALAWNADVINTRGGQTINGSLNLDHLTANGIWSRGGMWKNGDQPVATERYASERVPVGTIMMFAGDSAPPGWIMCHGGTVSGDQYPDYRNTVGTRFGGDWNNPGIPDMRGLFVRGAGTGGHILNQRGQDGYGKDRLGVGCDGMHVGGVQAQQMSYHKHAGGWGEYNRSEGPFGASVYQGYLGTRKYADWDNASYFTNDGFELGGPRDALGTLNREGLIGYETRPWNISLNYIIKIHY
Physico‐chemical
properties
protein length:516 AA
molecular weight: 55337,72740 Da
isoelectric point:5,77822
aromaticity:0,07946
hydropathy:-0,45736

Domains

Domains [InterPro]
DC_0176
STR
1–436
DC_0176
G3DSA:2.10.280.10
Unmapped
246–286
G3DSA:2.10.280.10 IPR037053 IPR044916
SSF69349
STR
246–346
SSF69349 IPR027448
IPR015173
STR
246–324
IPR015173 SSF88874
IPR011083
ATT
337–392
IPR011083
WWY65775.1
1 516
Architecture
STR
ATT
STR
STR 1-323 | ATT 324-392 | STR 393-514 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage 121/2022-2B
[NCBI] 		3103121 No lineage information
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WWY65775.1 [NCBI]
Genbank nucleotide accession
OR958571 [NCBI]
CDS location
range 160355 -> 161905
strand +
CDS
ATGAGTAACAATACATATCAGCACGTATCAAATGAATCAAAATATGTTAAATTCGATCCAGTAGGATCGAATTTTCCTGACACTGTCACGACAGTGCAGTCTGCATTATCAAAAATAAGTAATATTGGCGTAAATGGTATTCCTGATGCAACTATGGAAGTTAAAGGAATAGCAATGATTGCGTCAGAGCAAGAGGTTTTAGATGGAACTAATAATTCTAAAATCGTTACACCTGCTACATTAGCAACAAGATTATTGTATCCAAATGCTACTGAAACTAAATATGGTTTAACGCGCTATTCAACAAATGAAGAAACTTTAGAAGGCTCAGATAATAATTCGTCGATAACTCCACAAAAATTGAAATACCATACTGACGATGTATTCCAAAACAGGTATTCATCTGAATCATCAAATGGAGTTATTAAAATATCATCTACACCTGCGGCTTTGGCTGGTGTAGATGATACTACGGCAATGACTCCGTTGAAAACCCAAAAACTTGCAATAAAATTAATTTCACAAATAGCTCCTTCAGAAGACACTGCAACAGAATCCGTGAGAGGAGTAGTTCAGTTATCAACTGTCGCTCAAACTCGTCAAGGAACTCTTCGCGAAGGATATGCAATTTCCCCATATACCTTTATGAATTCCGTTGCAACACAAGAATATAAAGGTGTTATACGTCTAGGAACACAAGCAGAAATTAACAGTAATTTGGGAGATGTTGCAGTAACAGGCGAAACATTAAATGGTCGAGGAGCTACTGGTTCTATGCGTGGTGTAGTAAAATTAACGACGCAAGCCGGTATTGCCCCCGAGGGTGATGGCTCTGGAGCATTAGCATGGAACGCAGATGTAATTAATACACGCGGTGGACAAACTATTAATGGTTCTTTAAATTTAGACCATCTTACAGCAAATGGAATTTGGTCGCGCGGCGGTATGTGGAAAAATGGTGATCAACCTGTTGCCACTGAAAGATATGCGTCTGAAAGGGTTCCAGTTGGAACTATTATGATGTTTGCGGGTGATTCTGCACCTCCAGGTTGGATTATGTGCCATGGTGGAACCGTGTCAGGAGATCAATATCCTGATTATAGAAACACAGTTGGAACGAGATTTGGTGGTGATTGGAATAACCCTGGCATTCCTGATATGAGAGGTCTTTTCGTCAGAGGAGCTGGCACAGGTGGTCATATTTTAAATCAACGAGGACAAGATGGTTATGGGAAGGATAGACTTGGTGTAGGATGTGATGGAATGCATGTTGGTGGTGTTCAAGCGCAACAAATGTCATACCATAAACATGCTGGTGGTTGGGGAGAATATAACAGAAGTGAAGGTCCATTTGGCGCGTCTGTTTATCAAGGATATCTTGGAACTAGAAAATATGCCGACTGGGATAACGCTTCATACTTCACCAATGATGGATTTGAATTAGGTGGACCGAGAGATGCCCTTGGTACACTTAATCGTGAAGGATTAATTGGTTATGAAACTAGACCATGGAATATATCATTAAACTATATTATTAAAATTCATTACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b92049f30aa0d21520153b88375161a0afc6b1082f8a3b06589a8a9ba8d0db8a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6657
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of a newly isolated phage infecting antibiotic-resistant Escherichia coli Wanecka,A., Marynowska,M., Wesolowski,W., Bloch,S., Nejman-Falenczyk,B., Neumann,J., Krol,J., Florek,M., Ulanicki,K., Napierala,A., Twardon,J., Wolska,B., Porebska,J., Ziubrzycka,A., Czeretowicz,I. and Benisz,M. 2018-02 — GenBank