Protein

Genbank accession
AFD02981.1 [GenBank]
Protein name
late transcription gp55 sigma factor [Synechococcus phage metaG-MbCM1]
RBP type
TF
Evidence RBPdetect2
Probability 1,00
Protein sequence
MKRVAKKKQHYVDNQKFLAAIVEYKRRVDVAKEKGLEKPRVNDYIGGCFLKIANHLSFRPNFINYMYKDDMICDGIENCIQYIDNFNPEKSKNPFAYFTQIVYYAFLRRIAKEKRQMDIKDKIIDKYGYSDVFSVDGSATTDYNSI
Physico‐chemical
properties
protein length:146 AA
molecular weight: 17256,64700 Da
isoelectric point:9,20520
aromaticity:0,14384
hydropathy:-0,59315

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage metaG-MbCM1
[NCBI] 		1079999 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AFD02981.1 [NCBI]
Genbank nucleotide accession
JN371769.1 [NCBI]
CDS location
range 118892 -> 119332
strand +
CDS
ATGAAGCGAGTCGCCAAGAAAAAACAACACTACGTTGATAACCAAAAGTTCCTAGCAGCAATCGTCGAATACAAACGACGTGTCGATGTTGCTAAAGAAAAGGGACTGGAAAAACCTCGTGTCAACGATTATATTGGCGGTTGCTTTCTTAAGATTGCAAATCATCTGTCATTCCGTCCTAACTTTATCAACTATATGTACAAGGACGATATGATTTGTGATGGTATTGAAAATTGTATTCAATATATTGACAACTTCAATCCTGAAAAATCCAAGAACCCTTTTGCATACTTCACACAGATTGTATACTATGCATTCCTGAGACGAATTGCTAAAGAGAAACGGCAGATGGACATCAAAGATAAGATCATTGACAAGTATGGATACTCAGATGTATTCTCAGTTGACGGATCAGCAACTACCGACTATAATAGTATCTAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available.

Literature

No literature entries available.