Protein

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Genbank accession
AYM47388.1 [GenBank]
Protein name
tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MVTPTFRVFYPVKFNLRRFIMALVSQTTKNLKSGISQQPDILRYPEQGAVQINGWSSETEGLQKRPPLVFSKVLGAKGYLGTNPYIHLINRDEFEQYYACFTGTGVKVFDLTGNEYIVRGDTSYVTVANPREDLRMVTIADYTFIVNRTKVVDTLPDVSLPNFREKGSALINIRGGQYGRTLLVYLNDDVEEVAKLELPNGSDPSHVKQTDSQYIAEELAKQIRLKLPTWTITVGTGYVYIEAPVGTDIDKFITKDGYADQLIAPVTHFAQSFNKLPANAPDGYIIKIVGDTSKTADQYYVKWDAARKVWGETIGWGSEYKLDPVTMPWALVRAADGNFDLKMNTWTERKCGDEDTNPFPSFVDSKINDVFFWRNRLGFLSGENVILSRTAKYFGFFPTSVANLSDDDPIDVAVSHNRVSTLKYAVPFTEEMLIWADEAQFVMNAQGVLSSRSVELNLTTQFDVYDKARPYGIGRNIYFASPRATFTSINRYYAVQDVSSVKNAEDMTSHVPSYIPNGVFQIHGSATENYASVLTSGAESKVFLYKFLYQNETLQQQSWSHWDFGDNIRILSAASINSTMFLILENNGHVFMGYVLFTKDTVDYQGEPYRGYLDGKKAYTVPVGAYNEDTNETTVNISTVYGMGFDKGTISALEADGRVTSFEEPQGGWAANPTITFDGNLEGVTLFLGFNFLFTYEFSKFLIKKQADDGSIASEDTGRLQLRRAWVNYEDSGAFRIEVQNQSRTFEYLMGGARVGSQGLRASRLNVATGQYRFPVNGDARLNTVRIFSDYTTPLNVIGCGWEGNYMKRTTGI
Physico‐chemical
properties
protein length:813 AA
molecular weight: 91305,52440 Da
isoelectric point:5,37836
aromaticity:0,12792
hydropathy:-0,29360

Domains

Domains [InterPro]
IPR058003
TTP
21–813
IPR058003
AYM47388.1
1 813
Architecture
TTP
TTP 21-813
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AYM47388.1
1 813
Domain Start End Length (AA) Confidence
N-terminal 1 160 160 0,9808
Central domain 161 368 209 0,2177
C-terminal 369 813 444 0,1201
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-160
Central
161-368
C-terminal
369-813

Taxonomy

  Name Taxonomy ID Lineage
Phage Pectobacterium phage PP81
[NCBI] 		1927014 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Pektosvirus
Host Pectobacterium carotovorum subsp. carotovorum
[NCBI] 		555 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Pectobacterium

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AYM47388.1 [NCBI]
Genbank nucleotide accession
KY124276 [NCBI]
CDS location
range 25026 -> 27467
strand +
CDS
ATGGTGACTCCCACGTTCAGGGTCTTCTATCCCGTTAAGTTTAACCTAAGGAGGTTCATTATGGCCTTAGTATCACAAACAACAAAGAACCTGAAGTCTGGTATCAGCCAACAACCAGACATCTTACGGTATCCAGAGCAGGGAGCAGTACAGATTAACGGTTGGTCGTCCGAGACTGAAGGCCTCCAAAAGAGACCGCCTTTAGTGTTCAGTAAGGTTCTGGGCGCTAAGGGATACTTGGGCACCAACCCATATATTCACCTAATCAACCGCGATGAATTCGAGCAGTATTACGCTTGCTTCACAGGGACAGGCGTTAAAGTGTTTGACTTGACTGGTAATGAGTACATCGTACGCGGTGATACCTCATACGTCACCGTAGCGAACCCAAGGGAAGACTTAAGGATGGTCACCATCGCCGACTACACGTTCATCGTTAACCGAACCAAGGTGGTCGATACTCTCCCTGATGTGTCCCTTCCGAACTTCAGAGAGAAAGGCTCAGCGTTGATTAACATTCGTGGTGGTCAATACGGGCGTACACTGCTGGTGTATCTCAATGATGACGTTGAGGAGGTTGCTAAGCTGGAACTTCCAAACGGTAGTGACCCTAGTCACGTTAAGCAAACAGACTCACAGTACATCGCTGAGGAGTTGGCTAAACAGATTCGCCTTAAGTTGCCCACTTGGACAATCACGGTCGGTACTGGTTATGTCTACATTGAAGCACCAGTCGGTACGGACATCGATAAGTTTATCACTAAGGACGGTTACGCTGACCAATTGATTGCCCCTGTGACCCACTTTGCGCAGTCCTTCAATAAACTCCCCGCGAATGCACCTGATGGCTACATTATCAAAATCGTAGGGGACACCTCTAAGACTGCCGACCAGTATTACGTTAAGTGGGATGCAGCTCGTAAGGTCTGGGGTGAAACTATTGGATGGGGTTCTGAATATAAGTTAGACCCTGTGACCATGCCTTGGGCTTTGGTACGTGCAGCAGACGGTAACTTTGACCTCAAGATGAACACTTGGACAGAACGTAAATGTGGTGATGAGGATACCAACCCTTTCCCATCGTTTGTTGACTCCAAGATTAACGATGTGTTCTTCTGGAGAAACCGCTTAGGGTTCCTTAGTGGTGAGAACGTAATCCTGTCTCGCACAGCCAAGTATTTTGGGTTCTTCCCTACGAGCGTTGCGAACCTCAGTGATGATGACCCTATTGATGTTGCGGTAAGCCACAACCGAGTGTCAACCCTTAAGTACGCCGTACCGTTCACTGAAGAGATGCTCATTTGGGCTGACGAAGCGCAGTTCGTTATGAACGCCCAAGGTGTTCTGTCGAGCCGTAGCGTAGAGCTGAACCTTACGACTCAGTTTGATGTGTACGATAAGGCTCGCCCTTATGGTATCGGTCGTAATATCTACTTTGCGTCTCCTCGGGCAACCTTTACTAGTATCAACCGATACTACGCTGTGCAGGACGTCTCCAGTGTTAAGAACGCTGAGGATATGACCAGCCACGTACCGAGCTATATCCCTAACGGTGTCTTCCAGATTCACGGGTCGGCTACCGAGAATTACGCCAGCGTGTTAACTTCAGGGGCAGAGTCGAAAGTATTTCTCTATAAGTTCCTCTATCAGAATGAGACGCTACAGCAGCAATCATGGTCTCATTGGGACTTTGGGGATAACATTCGGATTCTCTCTGCGGCGTCCATTAACTCCACCATGTTCCTCATTCTGGAGAACAATGGGCACGTCTTTATGGGCTACGTCCTCTTCACGAAGGACACTGTGGATTATCAGGGTGAACCTTACCGTGGTTATCTAGATGGCAAGAAAGCCTACACGGTTCCTGTGGGTGCCTACAATGAGGATACCAACGAGACCACTGTGAACATCTCAACGGTGTACGGTATGGGATTCGATAAGGGAACCATTAGTGCGCTTGAGGCTGATGGTCGTGTGACCTCCTTTGAGGAGCCACAAGGAGGCTGGGCGGCTAACCCCACGATTACCTTTGATGGCAACCTTGAGGGAGTAACACTGTTCCTCGGGTTCAACTTCCTGTTCACTTATGAGTTCTCCAAGTTCCTCATTAAGAAGCAGGCTGATGATGGTTCCATTGCCTCAGAGGACACTGGTAGATTACAGCTCCGAAGGGCGTGGGTAAACTATGAGGACTCCGGTGCGTTCCGTATTGAGGTTCAGAACCAATCGAGAACCTTTGAGTATCTTATGGGAGGTGCTCGTGTAGGGTCTCAAGGCCTCAGGGCGTCCCGCCTCAATGTGGCTACTGGTCAGTATCGATTCCCTGTAAATGGGGACGCAAGGTTGAACACTGTGAGAATCTTCAGTGATTACACAACGCCACTAAACGTTATTGGCTGTGGCTGGGAAGGCAATTACATGAAGAGAACCACAGGTATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
08a9d80b1d7955806565cae98fbe2ce662fc6601a7f6ca95e0cc11b3b4b009d4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9095
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50