Protein

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Genbank accession
WPH64819.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MAFQNKRVVQNGVTLIPSNYREGEIVLDFIRKRVVSKDASGLMVDFTGTDNVSFPEAPADNKLYARKDESWQEFNEFIDAPSDSSKYARVSGNWEPVSEFPEAPIDNKKYGRTNNSWSEISEFQDAPSDGNKYTRKDGQWEVSDQVITSHSELSGRDVPDSHPASSISTESGDTVEQSLGKKSTKEELSEGITDSQNDIIGGSVFKGSDGDTVKVGDEIPSGTTHIKVSVGGNKFLVRAWGDLSLPAMITGIPTGTNEFLEYVVNTDQGEFKFVTKDVWELRGNGKKGEVFVEGFGADLTGATYCTDQVRKAAEYCASTGLPLNGGYYGTLRVEPTSSPIQLQTETDFSGVTIKPSCGDKTGLRIFETIEESGFQDVTSLVDLTRLTKGETRLYSSTANQPLGMEGFFAIETTVVSLYRWNNSTWTPEHVKQPVSVRGKWGSLSRPLQFDFTTHNTGLTIKYKPVRKPLNIKFGKLDLEGSKLFSLHISQRCNTHVQAPLLVNLENTASNAVYTLIQNLFMDEWKVSDAQGGQLGSETIGAYFALMSDCTNTVFSGCKNGYGWGGIDGNNSWGISAINDCEFFATSLHYNCADFIMIGGKVHRGSGIHGYGHFITDKVTYMMKARKDSDLNDNIVYTRTDYGSSWDGDIRLINPTITMKPTMSKINYVYIQGAKTDTTKRGVLENYVPNVAIENPVMNVIGTSVSNIDVNAIFLECSDENSLWYDYTYAPEFFRITNSYASSNNYVRYSSLTNEFDHTSGKYLKKKSDYFYCDVITAQAKLDPSFASQWSNSGFVANVQTLVFPKALGIKQTYNVTNCDMHGFLLRCTENITVNINGGAIVQPFRSPVGTQGNIQNYDPDSSFNVSDCRVIKVWDVTGSTAFDTLVIGVNWDNVIFDWASYFTQTEPAVSDPLFSPQFIAQTVSMLGCKIQNPRYPTKETVTAQVQNLVTNGYGSTTHYLASQQ
Physico‐chemical
properties
protein length:964 AA
molecular weight: 106662,58020 Da
isoelectric point:5,11360
aromaticity:0,10788
hydropathy:-0,39191

Domains

Domains [InterPro]
G3DSA:1.20.5.320
STR
44–79
G3DSA:1.20.5.320 G3DSA:6.20.230.10 G3DSA:6.20.230.10
DC_0194
STR
44–964
DC_0194
WPH64819.1
1 964
Architecture
STR
ATT
STR
STR 44-98 | ATT 99-143 | STR 144-964
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WPH64819.1
1 964
Domain Start End Length (AA) Confidence
N-terminal 1 305 305 0,9952
Central domain 306 933 629 0,9702
C-terminal 934 964 30 0,8001
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-305
Central
306-933
C-terminal
934-964

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_VpaP_SJSY21
[NCBI] 		3079971 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio parahaemolyticus
[NCBI] 		670 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WPH64819.1 [NCBI]
Genbank nucleotide accession
OR723929.1 [NCBI]
CDS location
range 81336 -> 84230
strand +
CDS
ATGGCTTTTCAGAACAAAAGGGTTGTGCAGAACGGAGTGACACTTATACCCTCTAACTACCGAGAGGGAGAGATAGTATTAGATTTTATAAGGAAGAGGGTAGTTTCAAAAGATGCCAGTGGTCTTATGGTTGATTTCACAGGAACTGATAATGTAAGTTTTCCTGAAGCCCCAGCAGACAATAAGTTGTATGCACGTAAAGACGAGAGCTGGCAGGAGTTTAATGAGTTTATTGATGCACCTTCGGATTCTAGCAAATATGCTAGGGTATCTGGTAATTGGGAACCTGTAAGCGAGTTCCCAGAAGCACCAATTGATAATAAGAAGTATGGCAGGACAAATAATTCATGGTCTGAAATTTCAGAATTCCAGGATGCACCTTCTGATGGTAACAAATATACAAGGAAAGATGGTCAATGGGAGGTGTCAGACCAAGTGATAACATCTCACTCAGAATTGTCAGGCAGGGATGTTCCAGATTCACACCCTGCTAGCTCTATCAGTACCGAATCTGGTGATACTGTCGAACAATCATTAGGTAAGAAATCCACTAAAGAGGAACTAAGTGAAGGCATTACTGACTCTCAAAACGACATCATAGGCGGTTCTGTATTTAAGGGATCGGATGGGGATACTGTAAAAGTTGGTGATGAGATCCCATCAGGCACAACTCACATTAAAGTTTCTGTTGGTGGAAATAAGTTTCTGGTTAGAGCTTGGGGGGACCTAAGCTTACCAGCAATGATAACAGGGATTCCAACGGGTACTAATGAATTCCTTGAGTATGTAGTCAATACGGACCAAGGGGAGTTTAAATTTGTAACTAAAGATGTTTGGGAACTTAGGGGTAATGGGAAGAAGGGTGAAGTATTTGTAGAGGGGTTTGGTGCCGACCTGACAGGAGCAACTTACTGTACTGATCAAGTAAGAAAGGCTGCTGAATATTGCGCATCAACAGGTCTTCCTCTGAATGGAGGATATTACGGAACATTAAGGGTTGAACCAACGTCAAGCCCTATACAACTTCAAACGGAAACTGACTTTTCTGGTGTTACAATCAAGCCAAGTTGTGGTGATAAAACTGGCCTTAGGATATTTGAAACTATAGAGGAATCAGGATTTCAAGATGTAACATCACTGGTTGATCTAACGAGGTTGACAAAGGGTGAAACCAGGCTTTACTCTTCTACTGCAAACCAACCTTTAGGTATGGAGGGTTTCTTTGCAATTGAAACAACTGTTGTCAGTTTGTACAGATGGAATAATTCAACGTGGACACCTGAGCATGTAAAACAACCTGTATCAGTACGCGGTAAATGGGGATCTCTGTCCAGACCGTTGCAGTTTGACTTTACCACTCACAACACTGGGTTAACCATAAAATACAAGCCAGTGCGCAAACCGTTGAATATTAAGTTTGGTAAGCTTGATTTAGAAGGTTCTAAACTATTTTCACTTCACATTTCACAGAGGTGTAACACACATGTACAAGCGCCATTACTTGTAAACCTAGAAAATACCGCGTCAAATGCTGTATACACTTTAATCCAAAACTTATTCATGGATGAGTGGAAAGTAAGTGATGCGCAAGGAGGTCAACTAGGTTCTGAGACAATAGGTGCTTACTTCGCATTAATGAGTGATTGTACTAATACTGTATTCTCAGGATGTAAGAATGGTTACGGATGGGGAGGAATAGACGGTAACAACTCTTGGGGGATCTCAGCTATAAACGATTGCGAGTTCTTTGCAACATCGCTCCACTACAACTGTGCAGACTTCATCATGATAGGTGGCAAGGTGCACAGGGGCAGTGGGATTCATGGTTATGGGCACTTTATAACAGATAAAGTCACCTACATGATGAAGGCCAGAAAGGATTCTGATTTAAATGACAATATCGTATATACGCGCACAGACTATGGCTCATCTTGGGATGGAGATATTCGACTAATCAATCCAACAATAACCATGAAGCCAACCATGAGCAAGATCAACTATGTGTACATACAGGGTGCGAAAACTGACACAACTAAGCGTGGTGTTCTTGAGAACTACGTTCCTAACGTGGCAATAGAAAATCCTGTAATGAATGTGATCGGCACATCGGTGTCAAATATTGATGTGAATGCCATATTCTTGGAATGCTCTGACGAAAATTCACTATGGTATGACTACACTTATGCGCCTGAGTTTTTCAGAATTACAAACTCTTACGCATCATCTAATAACTATGTTAGGTACAGTTCACTGACTAACGAGTTTGACCACACATCTGGTAAATATCTTAAGAAAAAATCAGATTACTTCTATTGTGATGTGATAACTGCTCAAGCAAAATTAGACCCATCATTCGCAAGTCAATGGTCAAATTCTGGATTCGTAGCTAATGTGCAAACCTTAGTGTTTCCGAAAGCGTTAGGTATAAAACAAACATACAACGTAACAAACTGTGATATGCACGGGTTCCTGCTGCGTTGCACTGAGAATATTACGGTAAACATCAACGGTGGTGCTATAGTTCAGCCGTTTCGTTCACCAGTAGGAACGCAGGGTAATATTCAAAACTATGACCCTGACTCATCTTTTAATGTTTCTGACTGCAGAGTGATTAAGGTATGGGACGTTACAGGGAGCACTGCATTTGACACACTAGTAATAGGTGTTAACTGGGATAATGTCATTTTTGATTGGGCGAGTTATTTTACACAAACCGAACCAGCAGTAAGTGACCCTCTGTTTTCGCCGCAATTCATTGCTCAAACAGTATCTATGCTAGGGTGTAAGATACAGAATCCTAGATACCCAACAAAAGAAACGGTAACAGCACAGGTTCAGAACTTAGTTACTAACGGTTACGGTAGTACAACTCACTACCTTGCATCTCAACAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4bda9ba7382be899e6175337329ebbd020140caaafb12a588e786040d1fb423b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6175
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50