Protein

View in Explore
Genbank accession
YP_010774466.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,81
Protein sequence
MAVTISGTLKDGMQNILPNTELELRAKKTSAKVIVESVAHYYTSLQGTYNFPLEVGAYALYINFGSMGPQYVGDITVLVDSINGTLENFLTIPGEDEITPEILQQVLQARLDAQTAADQAKYWSEQAAAYASAASALSRLYKTQADAIAAIGRGEIPDGGLYTTVGAESEDLYDVWQNVGGTPTPVLDADGDQLSYPSTKAIKKVLEMVRRDPNSPDFLQLKNSKGYVAFLVAADYSIRSGSNIVISNTEIRNGIVSLAAGVINLQSYKMRYDSTLPVSLRINYKGGYYSDIVDSTGKVIGTTGDTPTPPETDDPYQIKARNAENMAKANQITSRKVMGIASLSSQINGIIMFGQSLSTGYEGWPAISTLWNERLNNLMLGNATRPNTRSGNSFVPVGTTQFTGLKAVVQRGSDPTHIMTAEEIAALSPGASEEGESPLVGAVNYLKWLYLQHWGLPKDDNMQLVASDCGVAGRTIEQLRQNHWLRFTQCVDAHKAEADRLGKTYSVAILYFMQGEWNYTTAYGGTTDKTIYKGLMKSLKDDMISYVKSVTGQEFDPAFIIYQTGAGYTNVDDQIKIGMAQLEFANEEPGVWCAGPVYQLTDKGGHLQPNGYRAYGMYLGYTGYLACVARLDSRATQPLKYTVYGKRVVIGDFLARDFPLRFEVAYDGVTAKDYITKGFKVVDSVGLVNLESVELVADTVLKITTSRDMVGAVSVVYAGKNDFNGNGNLTDSNPTTPMESYVYQEGTGQYPTTNIPELVNKPYSMHNWCLAHRIQAEVIQ
Physico‐chemical
properties
protein length:780 AA
molecular weight: 85253,13000 Da
isoelectric point:5,12400
aromaticity:0,09487
hydropathy:-0,22795

Domains

Domains [InterPro]
IPR013609
ATT
1–128
IPR013609 IPR036514
DC_0547
STR
71–773
DC_0547
SSF52266
STR
469–621
SSF52266
YP_010774466.1
1 780
Architecture
ATT
STR
ATT 1-128 | STR 129-773 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010774466.1
1 780
Domain Start End Length (AA) Confidence
N-terminal 1 612 612 0,6985
Central domain 613 769 158 0,5344
C-terminal 770 780 10 0,6905
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-612
Central
613-769
C-terminal
770-780

Taxonomy

  Name Taxonomy ID Lineage
Phage Serratia phage vB_SmaS_Tlacuache
[NCBI] 		2894809 Uroviricota > Caudoviricetes > Serbinvirus >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010774466.1 [NCBI]
Genbank nucleotide accession
NC_074757.1 [NCBI]
CDS location
range 16404 -> 18746
strand +
CDS
ATGGCTGTTACCATCTCAGGAACCCTCAAAGACGGGATGCAGAATATTCTTCCCAATACTGAGCTTGAGCTCAGGGCTAAGAAGACCTCCGCTAAGGTCATTGTGGAATCCGTTGCACACTATTATACATCGCTCCAGGGTACTTACAACTTCCCCCTCGAAGTGGGTGCCTACGCCCTCTATATTAACTTCGGTAGTATGGGGCCTCAATACGTAGGGGACATCACCGTTCTCGTTGATTCAATCAATGGTACTCTGGAGAACTTCCTCACTATTCCCGGAGAGGACGAGATTACCCCGGAGATTCTCCAACAGGTCCTCCAGGCTCGTCTGGACGCTCAGACAGCCGCTGACCAGGCTAAGTACTGGTCAGAACAGGCCGCAGCTTATGCCAGCGCAGCCTCTGCTCTGTCCCGACTCTATAAGACCCAAGCAGATGCCATCGCGGCCATAGGCCGAGGGGAGATTCCAGATGGGGGACTATATACTACCGTTGGAGCGGAGTCGGAGGACCTCTATGATGTGTGGCAGAACGTGGGGGGAACTCCAACCCCCGTCCTGGATGCAGATGGAGACCAGCTCTCATATCCAAGTACCAAGGCTATTAAAAAGGTTTTGGAGATGGTTCGCAGAGACCCTAACTCTCCGGACTTCCTTCAACTGAAAAACTCCAAGGGGTATGTGGCTTTTCTGGTAGCAGCTGATTACTCCATCAGGTCTGGTTCCAACATCGTAATCAGTAATACCGAGATAAGAAACGGAATCGTGAGTCTGGCGGCTGGGGTGATTAACCTCCAGTCTTACAAGATGAGATATGATTCTACCCTTCCCGTCAGCCTAAGAATTAATTATAAGGGTGGGTACTACTCGGACATCGTGGACTCCACTGGTAAGGTGATAGGTACTACGGGGGATACTCCAACCCCCCCGGAAACCGATGACCCCTACCAGATAAAGGCCAGAAACGCCGAAAACATGGCCAAGGCTAACCAGATTACTTCGAGAAAAGTGATGGGTATTGCCTCCCTTTCTTCCCAGATTAATGGGATAATCATGTTTGGCCAATCCCTATCCACGGGGTATGAGGGTTGGCCGGCCATATCCACCTTGTGGAATGAGAGGCTCAACAACCTCATGTTGGGTAACGCTACCCGGCCTAATACCCGCTCGGGGAACTCATTTGTTCCAGTTGGAACCACCCAGTTTACGGGGTTAAAGGCCGTTGTACAGCGGGGTTCTGACCCCACCCACATTATGACCGCAGAGGAGATTGCTGCACTATCCCCCGGAGCCTCGGAGGAAGGGGAGAGTCCTCTGGTCGGGGCTGTAAACTATCTGAAGTGGTTATATCTCCAACACTGGGGATTACCTAAAGACGATAACATGCAACTGGTGGCCTCAGACTGCGGTGTGGCTGGTAGAACCATCGAGCAGCTTCGTCAAAACCACTGGCTCCGGTTCACCCAGTGTGTTGATGCTCACAAGGCCGAAGCTGACCGACTTGGCAAAACCTATTCTGTGGCCATCCTCTACTTTATGCAGGGTGAGTGGAACTACACCACCGCTTACGGAGGTACTACCGATAAGACCATCTACAAAGGGTTGATGAAGTCACTAAAGGATGACATGATATCCTATGTCAAGTCAGTTACTGGTCAAGAGTTTGACCCAGCATTTATCATCTACCAGACAGGAGCGGGTTATACTAACGTAGATGACCAAATCAAAATTGGCATGGCCCAGCTCGAGTTTGCTAACGAGGAACCGGGAGTATGGTGTGCTGGTCCTGTATACCAGCTTACTGACAAAGGTGGTCACCTACAGCCTAATGGATACCGGGCCTACGGAATGTATCTGGGATACACGGGATACCTAGCTTGTGTGGCTCGCCTGGACTCCAGAGCAACCCAACCATTAAAGTATACCGTCTACGGTAAGCGGGTGGTGATAGGAGACTTCCTAGCACGGGATTTCCCTCTAAGATTTGAGGTGGCCTACGATGGGGTTACTGCTAAGGACTATATTACTAAAGGGTTCAAGGTGGTAGACAGTGTAGGTCTCGTTAACCTGGAGTCAGTGGAGTTGGTAGCAGATACTGTACTTAAAATCACCACTTCGAGAGATATGGTGGGAGCGGTCTCGGTAGTATACGCTGGTAAGAATGACTTCAACGGTAATGGTAACCTTACCGATAGTAATCCAACCACTCCGATGGAGTCTTACGTATATCAGGAGGGGACGGGACAGTATCCAACAACCAATATCCCTGAGTTAGTTAATAAGCCTTATTCCATGCACAACTGGTGCTTGGCTCACAGGATTCAAGCGGAGGTAATACAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
07b80d1abd61cb202f3643ae7fcd2adfbc25e77d1fdf848180ea32a887173130
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8277
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50