Protein

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Genbank accession
YP_007677151.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 0,88
Protein sequence
MALLGDSGTYSAPVIGGFMSNATTTYGSWASLNTTYYKWTVPTGGTYELHANLRTRVWDATGFTKYAVLRNSDSNRNGDNVRMGCEFQNSGVYNNTQQHFVWIVSTTTANEIFYLQGQASANSTGHSVQSDSNGYNQLWWRRLA
Physico‐chemical
properties
protein length:144 AA
molecular weight: 16017,33980 Da
isoelectric point:7,88269
aromaticity:0,13889
hydropathy:-0,49931

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_007677151.1
1 144
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0005
Central domain 11 133 124 0,0012
C-terminal 134 144 10 0,9986
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-133
C-terminal
134-144

Taxonomy

  Name Taxonomy ID Lineage
Phage Prochlorococcus phage P-SSP3
[NCBI] 		382273 Uroviricota > Caudoviricetes > Autographivirales > Tritonvirus > Tritonvirus PSSP3
Host Prochlorococcus marinus
[NCBI] 		1219 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_007677151.1 [NCBI]
Genbank nucleotide accession
NC_020874 [NCBI]
CDS location
range 9111 -> 9545
strand -
CDS
ATGGCATTATTAGGCGATTCGGGAACATATAGTGCTCCAGTTATTGGTGGCTTTATGAGTAATGCTACAACAACGTATGGTTCTTGGGCGAGTTTGAATACTACTTATTATAAGTGGACAGTACCAACAGGTGGTACTTATGAATTACATGCAAATTTAAGAACTAGAGTCTGGGATGCAACTGGATTTACAAAATATGCTGTATTGAGAAACAGTGACAGTAATCGTAATGGAGATAATGTAAGAATGGGATGCGAGTTTCAAAATAGTGGTGTATATAATAATACTCAACAACATTTTGTCTGGATTGTATCTACAACAACTGCTAATGAGATATTCTATTTACAAGGTCAAGCTTCCGCTAATTCAACTGGTCATTCTGTGCAATCTGATTCAAATGGTTATAATCAATTATGGTGGAGGAGGTTAGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ad835cffb1cc61408f0021f007a7094cb59fd4bffaa843454f4419047cef5194
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5586
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Prochlorococcus phage P-SSP3 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank