Protein

View in Explore
Genbank accession
WAW44803.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,83
Protein sequence
MITPELIPSPFAAQGDKDPIPQTSSTGFANLRDGYTPDYEISLASNNPQAKAVERKIQNQLFFIATQNAQAWQRQMAPPWFQGMPGGYEQNAEVVRVGNDGIMRRYRSMVNANASDPLSSTTWEEQPAWSAMRSNIPMPAGGPGLSSGGEVITTGRNFNDLLNGTWEFFSDSVVIASQNAPVYPASAGAAAGMLEAKSWVSGANTFCVQRYTDRVGNVAVRGLNAGAWTNWMYAVNVMALQQGRVTYGVAAGSANAYTLTLVPQLQGGLVDGMILRVKFNTMNTGATTINVSGLGAKAIVGAANFPLTGGELGQGLIAELVFDAAGDRWRILAGAPRIQVGNADQDYQAPSWKQVKDYVASQKLTEVDWTDVVNKPNVAIQDTTPWFANLELSDARPFIDFHFNSNRAKDFDYRLISEADGSLAFYSLQGSAGPTQDILFNRNSVTFFQPRLDVAKNLAYIANSGPLWQNTTADQPGWKFTFAQGVDANNNAVIAVNTTNPDGSYRSQVMRWDWASTNVIFNNRPLFAGQYTPWDSGNFDPSTKLTVNATNQIAGPTGIRNTNGNTGNMNTWGSGSTTASYGNAAIQIFGKGGGEPAAIYFDNSQTGWYLGMDKDGQLKRAGWSLGNNSYVITDESNIRTHINTMAARPIWGNVEFWGPWNFNPNTKLTLDAFNDSQYTRMVNSAAKDVGIAAMTSYGDAAMSFFNYEASTPTGNRAAVISFVRNGARGVLFGLDTDNKLKWGGYSLGAVAFEIADSNNLMSLWSSHAAAPNWNGQTIWRSGNFNPDTKATLAARNTTSSPTIFSYGASGIASTGQVGALVVENNSVTNTAAAITFHSPQKYQVNFGLDADNVVKIGGGTMGGVAYPIIHSGNYNNYINQALVQVGLGGVGSYAILAVLDTSAPAASIAPGTIMDSSKLFYSSCDSTYRSSARPTGTWRCMGYVYNRDSTNGDSASLFQRVT
Physico‐chemical
properties
protein length:962 AA
molecular weight: 103392,67480 Da
isoelectric point:5,63032
aromaticity:0,10811
hydropathy:-0,26216

Domains

Domains [InterPro]
DC_0009
ATT
1–209
DC_0009 DC_1924
cd19958
STR
152–231
cd19958 DC_1924
DC_1788
STR
167–686
DC_1788
WAW44803.1
1 962
Architecture
ATT
STR
RBD
ATT 1-209 | STR 210-686 | RBD 687-962
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WAW44803.1
1 962
Domain Start End Length (AA) Confidence
N-terminal 1 402 402 0,8929
Central domain 403 605 204 0,3030
C-terminal 606 962 356 0,8071
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-402
Central
403-605
C-terminal
606-962

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PB10
[NCBI] 		3003737 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa PAO1
[NCBI] 		208964 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WAW44803.1 [NCBI]
Genbank nucleotide accession
OP831166.1 [NCBI]
CDS location
range 38596 -> 41484
strand +
CDS
GTGATCACACCCGAACTGATCCCCAGTCCGTTTGCCGCTCAGGGCGATAAAGACCCGATTCCACAAACCTCCTCCACTGGCTTCGCAAACCTTCGCGACGGCTATACGCCGGACTACGAAATCAGCCTGGCGTCGAACAACCCGCAGGCCAAAGCGGTCGAGCGGAAAATTCAAAACCAACTCTTCTTCATCGCGACCCAGAACGCACAGGCGTGGCAGCGACAAATGGCGCCGCCGTGGTTTCAGGGCATGCCTGGCGGCTACGAACAGAATGCAGAAGTCGTGCGCGTCGGAAATGACGGCATAATGCGGCGTTATCGTTCCATGGTGAATGCCAATGCGAGCGACCCTCTCAGCAGCACGACTTGGGAAGAACAACCCGCATGGTCGGCGATGCGCTCCAACATCCCGATGCCGGCCGGAGGCCCAGGCCTATCTTCTGGCGGAGAAGTCATCACGACCGGCCGCAACTTCAACGACCTGTTAAATGGGACGTGGGAGTTCTTCTCTGATTCAGTGGTTATCGCTTCTCAGAATGCCCCCGTATATCCGGCTTCCGCTGGTGCCGCTGCTGGCATGTTGGAGGCGAAATCTTGGGTGTCCGGAGCCAATACGTTCTGCGTCCAACGCTACACTGATCGCGTCGGGAACGTCGCTGTGCGCGGGCTTAATGCCGGAGCGTGGACCAACTGGATGTATGCGGTAAACGTCATGGCCCTTCAACAAGGTCGGGTCACCTATGGAGTCGCGGCCGGATCGGCGAACGCTTACACGTTGACGCTAGTTCCGCAGCTCCAAGGCGGCCTGGTGGATGGCATGATTCTTCGGGTCAAGTTCAACACCATGAACACCGGCGCTACTACCATCAACGTCTCCGGACTCGGCGCCAAAGCCATCGTCGGCGCGGCCAACTTCCCTCTCACTGGCGGCGAACTTGGCCAAGGACTCATCGCTGAGCTTGTCTTCGACGCAGCAGGCGACCGCTGGAGGATTCTGGCAGGCGCGCCGCGCATACAAGTCGGCAACGCCGATCAGGACTACCAGGCGCCGAGTTGGAAGCAAGTTAAAGACTATGTCGCGTCCCAAAAGCTCACCGAAGTGGATTGGACGGATGTCGTCAACAAGCCGAACGTCGCTATCCAAGATACAACGCCGTGGTTCGCCAATCTGGAGCTGTCCGATGCTCGGCCTTTCATCGATTTCCACTTCAACAGCAATCGCGCCAAAGATTTTGACTATCGGCTGATATCTGAAGCAGACGGATCGCTGGCTTTCTATTCGCTGCAGGGGTCTGCTGGGCCTACCCAGGACATCCTGTTCAACCGAAATTCCGTGACTTTCTTCCAGCCGCGACTCGATGTGGCGAAAAACCTCGCGTACATCGCGAACTCTGGCCCCCTTTGGCAGAACACCACCGCCGATCAGCCCGGTTGGAAATTCACCTTTGCACAAGGCGTGGACGCGAACAACAACGCGGTGATCGCAGTCAATACCACCAATCCGGACGGTTCCTATCGTTCACAGGTCATGCGATGGGACTGGGCGTCCACGAACGTCATATTCAACAACCGTCCGCTCTTCGCCGGTCAATACACCCCTTGGGATTCTGGGAACTTCGATCCTTCCACCAAGTTGACGGTGAATGCCACGAACCAAATCGCCGGCCCAACCGGGATTCGGAATACCAACGGCAACACCGGCAACATGAACACCTGGGGTTCCGGCTCCACGACGGCATCCTATGGCAATGCTGCCATTCAAATCTTCGGAAAAGGGGGCGGTGAGCCTGCCGCGATCTATTTCGACAACTCCCAGACCGGATGGTATCTGGGCATGGACAAGGATGGACAGCTCAAGCGGGCCGGCTGGTCGCTCGGCAATAACTCCTATGTGATCACCGACGAATCCAACATCCGAACCCATATCAACACAATGGCTGCGCGCCCGATTTGGGGGAATGTCGAGTTCTGGGGTCCGTGGAACTTCAATCCGAACACTAAGCTTACGTTGGACGCATTCAACGATAGCCAATACACCAGGATGGTAAACAGCGCCGCGAAGGACGTAGGGATAGCCGCCATGACAAGTTATGGCGACGCGGCTATGTCGTTCTTCAACTATGAGGCTTCGACGCCGACCGGGAATCGTGCTGCTGTAATTTCGTTTGTTCGTAACGGGGCACGAGGCGTTCTGTTCGGCCTGGACACGGACAACAAGCTGAAATGGGGCGGCTATTCTCTAGGTGCCGTCGCGTTCGAGATTGCCGACTCCAACAACCTCATGAGCCTGTGGTCATCCCACGCTGCCGCGCCGAACTGGAACGGGCAGACCATCTGGAGGTCGGGAAACTTCAACCCAGACACCAAGGCGACTTTGGCAGCTCGCAATACGACGTCATCCCCTACAATATTCAGTTATGGGGCGTCCGGAATCGCATCAACCGGACAGGTCGGTGCGTTGGTTGTGGAAAACAACAGCGTCACCAATACCGCAGCCGCCATCACGTTCCATTCGCCGCAGAAATATCAGGTCAACTTCGGCCTGGATGCGGACAACGTGGTAAAGATCGGTGGCGGCACAATGGGCGGCGTAGCATATCCCATCATCCACTCCGGCAACTACAACAACTACATCAACCAGGCGCTGGTTCAGGTAGGTCTTGGCGGCGTCGGTTCCTACGCGATCCTTGCCGTATTGGACACATCCGCGCCGGCAGCGTCCATTGCCCCCGGAACGATCATGGACAGTTCCAAGCTGTTCTATTCGTCCTGCGATTCGACCTATCGCAGCAGCGCCCGTCCGACGGGCACCTGGCGCTGCATGGGGTATGTGTATAACCGAGACTCCACCAACGGCGACTCGGCATCCCTATTCCAGCGGGTAACGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f5ce41350e95b15a36136c45b5f72c313b54b8687dd9e3a5be265173cf12172b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6135
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Design of phage-cocktail-containing hydrogel for the treatment of Pseudomonas aeruginosa infected wounds Shafigh,F., Sheikhzadeh,F., Aminifazl,M.S., Gholadze,S., Skurnik,M. and Zarrini,G. 2023-03-21 — GenBank