Protein

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Genbank accession
AZU98480.1 [GenBank]
Protein name
DNA condensation protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MIPFTRILDYGNIVSFKRTIKKAQFGSTHFVILDSKGVLWGCGTNNYNQLGFTNTNVSYYGRSVEIMTNVFDVWVYGNYTLIKKSDGTFWYTGLGGINDTASSWVRMLFEFGSIDPSTIVDVFCHQQMLHFKDINGNIYAIGSNSNVNSGISGSGSLSVLTEVQGITDVNYIQYTTAAGSAVALCNNGDMYVWGRNANGEFGLGNNNAIRSPMFFTQNALMVGTGYSSSMYFNINKSLSSAGNQIYGQLGNGNVSTTHVNQLYYQIVSYSGDTSNLRPIHRGNGIFNMAFVSDTGVYSTGYKTGIFGTAYGGETGIGRFTKCTLNIDFSKVIGLSSSNLTSCLYTDEEMYQSGDGRWILGDGSINETIEYKKVKLPWEEI
Physico‐chemical
properties
protein length:380 AA
molecular weight: 41690,16410 Da
isoelectric point:5,95862
aromaticity:0,13158
hydropathy:-0,13526

Domains

Domains [InterPro]
DC_0433
ATT
1–109
DC_0433 IPR009091
IPR009091
STR
5–106
IPR009091 IPR009091
IPR009091
STR
15–213
IPR009091
IPR000408
STR
23–39
IPR000408 IPR000408 IPR028641
IPR000408
STR
183–204
IPR000408
IPR000408
STR
188–235
IPR000408
AZU98480.1
1 380
Architecture
ATT
STR
ATT 1-109 | STR 110-376 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AZU98480.1
1 380
Domain Start End Length (AA) Confidence
N-terminal 1 164 164 0,2067
Central domain 165 369 206 0,5705
C-terminal 370 380 10 0,8124
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-164
Central
165-369
C-terminal
370-380

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage Munch
[NCBI] 		2500169 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella
[NCBI] 		590 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AZU98480.1 [NCBI]
Genbank nucleotide accession
MK268344 [NCBI]
CDS location
range 346236 -> 347378
strand -
CDS
ATGATACCATTTACGAGGATATTGGATTATGGGAACATTGTTTCGTTTAAGAGAACTATAAAAAAAGCACAATTTGGCAGTACTCATTTTGTAATACTGGATAGTAAAGGTGTATTATGGGGATGTGGAACTAACAATTATAATCAATTAGGTTTTACTAATACTAATGTATCATATTATGGAAGAAGTGTTGAGATCATGACAAATGTTTTTGATGTATGGGTATATGGGAATTATACCTTAATCAAGAAGAGTGATGGTACTTTTTGGTATACAGGATTAGGTGGTATAAATGATACTGCTAGTAGTTGGGTAAGAATGTTATTTGAATTTGGTTCTATTGATCCTTCTACTATTGTTGACGTATTTTGTCATCAACAGATGTTACATTTTAAAGATATTAATGGAAATATATATGCAATTGGTTCAAATAGTAATGTGAATAGTGGAATATCTGGTTCTGGTTCGTTATCAGTACTGACCGAGGTTCAGGGAATAACTGACGTTAATTACATTCAATATACAACAGCGGCGGGAAGTGCAGTTGCGTTATGCAACAATGGTGATATGTACGTATGGGGTAGAAATGCTAATGGTGAATTTGGATTAGGTAATAATAATGCAATTAGAAGCCCAATGTTTTTCACACAGAATGCATTGATGGTTGGAACTGGTTATAGTTCAAGTATGTATTTTAATATCAACAAATCTCTTTCATCGGCTGGTAATCAGATATATGGTCAATTAGGTAATGGTAATGTAAGTACAACGCACGTGAATCAATTATATTATCAGATTGTGTCCTATAGTGGTGATACGAGTAATTTAAGGCCAATCCATCGAGGAAATGGTATATTTAATATGGCTTTTGTTAGTGATACTGGAGTATACAGTACTGGATATAAAACGGGAATTTTTGGTACTGCATATGGTGGTGAAACTGGCATTGGAAGATTTACGAAATGTACGTTGAATATTGATTTTTCTAAGGTCATTGGGTTATCTTCATCGAATCTTACATCTTGTTTATATACAGATGAAGAGATGTATCAATCAGGTGATGGTAGATGGATATTAGGTGATGGAAGTATAAATGAAACGATTGAGTATAAGAAAGTTAAATTACCGTGGGAGGAAATATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
448bd7acf99ca1ec474fc8a68921f09d580716a4f873bc7362cb7c9a9aabfe3c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8317
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Salmonella myophage Munch Crosby,S.T., O'Leary,C.J., Xie,Y., Gill,J. and Liu,M. 1988 — GenBank