Protein

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Genbank accession
XLL20364.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,83
Protein sequence
MSNSVFNNLPQGASRNKIEFLARLIDAQYASINEQNTLIQNLTINQGIATLAEHPAQPTAPTMYFNSTDKHFYGFNGESWQQLDNVMLENTERYFWKIGGEYNSNLTAVNGNFYLPTIEEGGAIEYEIIFKPEDLPYLSEKSDYRRQIMYGVHSDIEFRAGLDVSGVPTKPSDYWIIFPSNRFDVFIDNEPVQSHTEIGRIFDGQSHKIRYLIKLGACDAPQIGAYFNGVIHSLKAYQSNGVQVWDMPMNEGKGITFTCKLTGVIYERQEGAFQPQGSSGQWVKG
Physico‐chemical
properties
protein length:285 AA
molecular weight: 32240,67780 Da
isoelectric point:5,08603
aromaticity:0,12632
hydropathy:-0,43404

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XLL20364.1
1 285
Domain Start End Length (AA) Confidence
N-terminal 1 102 102 0,8836
Central domain 103 274 173 0,2669
C-terminal 275 285 10 0,9878
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-102
Central
103-274
C-terminal
275-285

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 10N.286.52.C10_PE001
[NCBI] 		3385318 Viruses > Varidnaviria > Abadenavirae > Produgelaviricota > Belvinaviricetes
Host Vibrio cyclitrophicus
[NCBI] 		47951 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XLL20364.1 [NCBI]
Genbank nucleotide accession
PQ189338 [NCBI]
CDS location
range 9378 -> 10235
strand +
CDS
ATGAGCAATTCTGTTTTTAATAATCTACCTCAAGGCGCTAGTCGCAATAAAATTGAGTTCCTAGCAAGGCTGATTGACGCACAGTATGCATCAATTAATGAGCAAAACACGTTAATTCAAAATTTAACGATTAATCAAGGTATAGCGACACTAGCAGAGCATCCTGCACAGCCTACTGCGCCAACAATGTATTTCAATTCTACCGATAAACACTTTTATGGCTTCAATGGTGAGAGCTGGCAACAGTTAGACAATGTGATGCTTGAAAATACAGAGCGTTATTTTTGGAAAATTGGCGGTGAATACAACTCCAATTTAACCGCTGTGAACGGGAACTTTTATTTGCCCACCATTGAAGAAGGTGGCGCGATTGAGTATGAAATAATTTTCAAACCAGAAGATTTACCTTACTTGTCAGAAAAGTCTGATTATAGACGACAAATTATGTATGGCGTCCACTCAGATATAGAGTTTAGAGCAGGGTTGGATGTAAGCGGGGTACCAACAAAACCAAGTGATTATTGGATTATTTTCCCATCCAACCGCTTTGACGTATTCATTGATAACGAGCCAGTACAGAGCCATACAGAAATAGGGCGAATATTCGACGGGCAAAGCCACAAAATCCGCTATTTAATCAAGTTGGGGGCGTGTGATGCTCCTCAAATTGGGGCGTATTTCAACGGTGTCATACACAGCTTGAAAGCTTACCAATCTAACGGCGTTCAAGTGTGGGATATGCCAATGAATGAGGGTAAGGGGATTACTTTTACCTGTAAGTTAACGGGCGTTATATATGAGCGTCAAGAGGGTGCATTCCAACCGCAAGGTTCATCAGGCCAATGGGTTAAGGGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e0f6da571aad384edad97b1023fbe0c4469b8fd22c569161a86b3d5c9c166923
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6236
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50