Protein

View in Explore
Genbank accession
BBI90235.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MIKYDIGKDEIVLHLEDSKYIMGYTIVGGYDENNGDVKISRSILPDGFFTEFVSTKYVYYKNTNEVIYNKNFKDNAKSIEDADYQPPKKYVPKEDYKKLESEVEELKRMLQELLSKKG
Physico‐chemical
properties
protein length:118 AA
molecular weight: 13839,52170 Da
isoelectric point:5,26638
aromaticity:0,12712
hydropathy:-0,79576

Domains

Domains [InterPro]
DC_0295
STR
3–118
DC_0295
IPR021358
STR
14–74
IPR021358 Coil
BBI90235.1
1 118
Architecture
STR
STR 3-118
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage MR003
[NCBI] 		2496589 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus aureus subsp. aureus RN4220
[NCBI] 		561307 Bacteria > Firmicutes > Bacilli > Bacillales > Staphylococcaceae > Staphylococcus

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BBI90235.1 [NCBI]
Genbank nucleotide accession
AP019522.1 [NCBI]
CDS location
range 83926 -> 84282
strand +
CDS
ATGATAAAGTATGACATTGGTAAAGATGAAATTGTGTTACATTTAGAAGATAGTAAGTATATCATGGGTTACACTATTGTTGGAGGGTATGATGAGAACAACGGTGACGTAAAAATTTCTAGGTCAATTCTTCCTGACGGGTTTTTTACTGAGTTTGTTAGTACTAAGTATGTATACTATAAGAATACTAACGAAGTAATATATAACAAAAATTTTAAGGATAATGCTAAGAGTATTGAAGATGCTGATTACCAACCACCTAAAAAGTATGTTCCTAAAGAAGATTATAAAAAGCTAGAAAGTGAAGTAGAAGAATTAAAAAGAATGCTACAAGAATTGTTATCTAAGAAAGGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
af8eab9cf973f5648b02700bd2987659d5a18311d9d853cf76c3bb2c2ccbacf3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8155
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Whole genome analysis of Staphylococcal phage phiMR003 Peng,C., Tomoko,H., Azam,A.H., Cierra,L., Ung,P., Takeaki,M., Miyanaga,K. and Tanji,Y. 2022-06-21 — GenBank