Protein

View in Explore
Genbank accession
WKL13435.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MARFKNPETIHVADGVEAVFSLDFPFLRREDVFVQVDKILVTDYTWVDDTNIQLAVVPKKDQEVRIFRDTPAQVPDTQFSQGIPFLPRYIDANNKQLLYAVQEGINTANLALDGVLDAIRIAEEARRLAQEALDAANEALRRALGFAEIRTVTEDSDIDPSWRGYWNRCITADKPLTLTMQMEDPDAPWVEFSEVHFEQAGVRDLNIVAGPGVTINRLQNTTMQLYGENGVCTLKRLGANHWIVFGAMEDE
Physico‐chemical
properties
protein length:251 AA
molecular weight: 28353,65260 Da
isoelectric point:4,58778
aromaticity:0,08765
hydropathy:-0,24781

Domains

Domains [InterPro]
IPR005604
ATT
12–117
IPR005604 Coil
DC_0220
STR
12–251
DC_0220
WKL13435.1
1 251
Architecture
ATT
STR
ATT 12-117 | STR 118-251
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PaeA_SB
[NCBI] 		3058943 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa PAO1
[NCBI] 		208964 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WKL13435.1 [NCBI]
Genbank nucleotide accession
OR208619.1 [NCBI]
CDS location
range 16763 -> 17518
strand -
CDS
GTGGCTCGGTTCAAGAATCCCGAGACCATCCACGTTGCAGATGGGGTCGAGGCTGTCTTCAGTCTCGACTTCCCGTTCCTGCGGCGTGAGGACGTGTTCGTCCAGGTCGACAAAATACTCGTCACCGACTATACGTGGGTAGACGACACCAACATTCAATTGGCCGTGGTGCCGAAGAAGGATCAAGAGGTCCGCATCTTCCGCGACACGCCCGCCCAGGTCCCGGACACTCAGTTCAGCCAGGGCATCCCGTTCCTGCCTCGATACATCGACGCGAACAACAAGCAGCTACTGTACGCTGTGCAGGAAGGCATCAACACCGCGAACCTCGCCCTTGACGGCGTACTCGACGCGATCCGTATCGCCGAGGAAGCTCGCCGCTTGGCACAGGAGGCACTCGACGCCGCCAATGAGGCGCTTCGTCGTGCCCTGGGCTTCGCTGAGATTCGCACCGTGACCGAGGACTCGGATATTGATCCGAGCTGGCGTGGTTACTGGAACCGCTGCATCACTGCCGACAAGCCCCTGACCTTGACCATGCAGATGGAAGACCCGGATGCACCTTGGGTCGAGTTCAGCGAGGTTCACTTTGAGCAGGCTGGTGTGCGTGACCTGAACATCGTAGCCGGCCCTGGCGTTACCATCAACCGTTTGCAGAACACCACCATGCAGCTCTACGGCGAGAATGGCGTGTGTACCCTCAAGCGGCTGGGCGCTAACCACTGGATCGTGTTCGGGGCCATGGAGGACGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
fe5382ef157240d15682787db25008ed9f5b4fab00a018817a83724f5391211a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9060
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteriophage discovery pipeline from phage isolation to preparation of emergency patient therapy: An example of a Pseudomonas phage therapy preparation workflow Wuerstle,S., Lee,A., Kortright,K.E., Winzig,F., An,W., Stanley,G.L., Rajagopalan,G., Blazanin,M., Hajfathalian,M., Bollyky,P., Turner,P.E., Koff,J.L. and Chan,B.K. 2023-05 — GenBank