Protein
View in Explore- Genbank accession
- URC25743.1 [GenBank]
- Protein name
- tail fibers protein
- RBP type
-
TF
- Protein sequence
-
MAIYRTGQASMDAQGYITGYDTKWREQLTLIRPGATIFFIDAPFQAAVISEVISDTQIRAITTGGAEIGRSNYIILLHDSITVDGLAQDVAETLRYYQSKETQIEEAIEFFKNFDLKQLQDLANQVKADTNAIKEQKAKVDKQQEEIETLKSEIADLKEAVAALLDKPTTLES
- Physico‐chemical
properties -
protein length: 173 AA molecular weight: 19321,53680 Da isoelectric point: 4,60824 aromaticity: 0,07514 hydropathy: -0,29711
Domains
Domains [InterPro]
DC_0313
STR
1–133
STR
1–133
Coil
Unmapped
116–167
Unmapped
116–167
DC_0096
STR
130–171
STR
130–171
1
173
Architecture
STR 1-171 |
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Escherichia phage EC147 [NCBI] |
2936947 | Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes |
| Host |
Escherichia coli [NCBI] |
562 | cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales |
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
URC25743.1
[NCBI]
Genbank nucleotide accession
ON185589.1
[NCBI]
CDS location
range 26334 -> 26855
strand -
strand -
CDS
ATGGCAATTTACAGAACCGGACAAGCGTCAATGGACGCTCAAGGTTATATTACTGGATACGACACGAAATGGCGAGAGCAACTAACGCTCATTCGCCCTGGTGCAACAATCTTTTTCATTGATGCGCCATTTCAAGCGGCTGTGATCAGTGAAGTTATCAGCGATACACAAATCCGCGCCATCACAACTGGAGGCGCTGAAATTGGGCGAAGCAATTACATTATTTTGCTGCATGACTCAATCACGGTTGACGGCCTTGCGCAAGATGTTGCGGAAACTCTGCGTTACTATCAAAGCAAAGAAACTCAGATCGAGGAAGCTATTGAATTTTTCAAAAACTTTGACCTAAAACAGTTGCAAGATCTGGCTAATCAGGTTAAAGCAGACACTAACGCAATCAAGGAGCAAAAGGCAAAAGTTGACAAGCAACAAGAGGAGATCGAAACACTTAAATCTGAAATTGCAGATCTCAAAGAGGCGGTGGCGGCGTTACTCGACAAGCCAACAACGCTGGAAAGTTAA
Genome Context
Genome Context
Tertiary structure
PDB ID
381eb71db9ed9a187e79f93e7549cb2fdab74b48c50318680140749b8374434f
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50
Literature
| Title | Authors | Date | PMID | Source |
|---|---|---|---|---|
| Complete genome sequences of 17 Escherichia coli bacteriophages isolated from wastewater, pond water, cow manure and bird feces | Vitt,A.R., Ahern,S.J., Gambino,M., Holst Sorensen,M.C. and Brondsted,L. | 2022-10-20 | — | GenBank |