Protein

View in Explore
Genbank accession
YP_007674974.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
RYNIEVNSNGGPYTSVFDDGYVEVSGKSDSEFQRAYEFALPGSGPWNVRVSRVTADNDSVYIQNSIFWQSFVEIIDEKFAYPNTALLALKIDARQFNSIPDVSVKLRGKRVQVPTNYNPETRTYTGIWDGTFQMAWTDNPAWIFRDIVLNERFGVRRYVNSIAIDPWYLYTVSQYCDELVPDGAGGYEPRFTCNVYLQNPGGVYEVLNALASCFRGLIYYSEGQLYLTQDRAQLPVQQFSEANVIQDVGENGEVSSPCFNYSGTARTARKTVVLANWDDPNQVYSSVTEYQQDDQLLERFGYNPIDLRLLGVTSRGQALRAAKHTLFSNRYETERVSFRIGAEGLAAGVGEVIQIADPLKQGQRLGGRIRAINGNTITLDAKLNLSESIDYTLTLVVPDGETETNPDGSITTRPKLQVLNLVSFTDIGEEVGERNIVTQSGDFFVTQQGTDFIVGIVRTSEETETKIELDGVIDSQVGALWVLEWSELNAALYKIISVAEIDPLIYQVEAVQYNDSKFAYVDNDLPIAVPKDRFTISSATAPTNLSAALRYSNGQTSIRATWKAPQRNDATDLLIRGYRYQWRKSGDTEWSEIAQTATTKVEIPLSLHVFGNSYQVRVASTNRLGSQSDWLVYDVDAFEAIPDLSDAEYNAVVRHQNQPDGTQLLIVDSGTCPIPERVSGYRCWAKPIDVPTVIPGVKEPDADGWYFLADIPLTGYYTIAFHAPGDWQIRVAFTSSIFGENPADYLYDTVDREKIVPPTPTNFSVVENYNGSGKRFSWQVPLTGYGSWDQNTVADIVGYEVRYKQGDLVNSSPSETWEAGIELASGGLPAQQQWFETALFDSDQWVVMVKTVDATQWRSDDPAYILVNITAPPINNAVQTINAKTQGAGNWPGDYDNCSVVSGDLVQTDATQDSTFTWTFDNNNLESALLLTTTADATYQHQIAALTGEAIEVTQEDDFNILQENDDKLLAEQRFYTESELSEGGVLHPYAPYEKLLADLYRVRTLFKSPDGGSTAGEITALTAQLDYADVVEKINDAAISSAGTAVSLTKTFRSVESVAITALQTGGSTAVTAVIVSKTTSAVTVKCLDSSGSAVAGTVDLIVTGY
Physico‐chemical
properties
protein length:1107 AA
molecular weight: 122264,12360 Da
isoelectric point:4,43955
aromaticity:0,10479
hydropathy:-0,26631

Domains

Domains [InterPro]
DC_0129
STR
1–666
DC_0129 DC_1836
IPR053171
Unmapped
2–404
IPR053171 IPR013783
IPR055385
ATT
2–77
IPR055385 IPR032876 IPR003961
IPR036116
STR
541–630
IPR036116
IPR003961
STR
541–643
IPR003961
YP_007674974.1
1 1107
Architecture
ATT
STR
ATT
STR
RBD
ATT 1-77 | STR 78-202 | ATT 203-372 | STR 373-666 | RBD 841-1107
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage KBS-S-2A
[NCBI] 		889953 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_007674974.1 [NCBI]
Genbank nucleotide accession
NC_020854.1 [NCBI]
CDS location
range 1 -> 3324
strand +
CDS
CGTTACAACATTGAAGTCAACTCAAATGGCGGGCCTTATACGAGTGTTTTTGATGATGGATATGTTGAAGTTAGCGGCAAATCAGATAGCGAATTTCAGCGAGCCTATGAGTTTGCGTTGCCTGGTAGCGGCCCGTGGAACGTGCGGGTTTCTCGCGTAACGGCAGACAACGATTCTGTCTATATTCAAAATTCAATCTTCTGGCAAAGTTTTGTAGAAATTATTGATGAAAAGTTTGCCTACCCTAACACCGCACTACTTGCGTTAAAAATTGACGCACGGCAATTCAATTCAATTCCAGATGTATCCGTCAAACTTCGGGGTAAGCGTGTTCAGGTTCCGACTAACTACAATCCCGAAACTCGCACTTACACCGGAATCTGGGATGGCACGTTCCAGATGGCATGGACCGATAATCCAGCGTGGATCTTCCGTGACATCGTTTTAAACGAGCGTTTTGGTGTCAGACGGTATGTCAACTCAATCGCAATCGACCCTTGGTATCTCTACACCGTTAGCCAGTATTGCGACGAGTTGGTCCCTGATGGTGCAGGTGGTTACGAGCCACGTTTTACATGTAATGTTTACCTGCAGAATCCTGGCGGCGTTTATGAAGTTCTCAATGCGCTAGCGTCATGTTTCCGTGGTTTAATTTATTACAGCGAAGGGCAACTGTATTTAACGCAAGATCGCGCTCAACTTCCTGTCCAGCAATTCAGCGAAGCTAACGTCATCCAAGATGTTGGCGAAAACGGTGAAGTATCTTCGCCCTGTTTTAATTACAGCGGCACTGCAAGAACAGCGCGCAAGACTGTTGTTCTGGCGAACTGGGACGATCCAAATCAGGTTTATTCTAGTGTTACTGAATACCAGCAAGACGATCAACTGCTGGAGCGTTTTGGGTATAACCCAATTGATCTTCGGTTGCTTGGAGTAACATCACGCGGCCAAGCATTACGCGCAGCAAAACATACGCTATTTAGCAATCGGTACGAGACTGAGCGTGTCAGCTTCCGCATTGGCGCCGAAGGTCTTGCTGCTGGTGTCGGTGAAGTAATTCAGATTGCCGATCCACTGAAGCAAGGTCAACGCCTTGGCGGGCGAATCAGGGCAATCAATGGAAACACGATTACGCTTGATGCAAAATTAAATCTAAGCGAAAGCATTGATTACACATTGACGCTGGTCGTTCCCGACGGGGAAACAGAAACGAATCCTGACGGAAGTATTACTACAAGACCCAAGCTGCAGGTTCTGAATCTGGTTAGCTTTACCGATATTGGAGAAGAAGTTGGTGAGCGAAATATCGTTACTCAATCTGGCGACTTTTTCGTAACACAACAGGGCACTGATTTTATTGTTGGTATTGTTCGCACATCAGAAGAAACAGAAACCAAGATTGAGCTTGATGGTGTTATTGATTCTCAAGTCGGCGCCTTGTGGGTGCTGGAATGGTCTGAACTTAATGCAGCACTGTATAAAATTATTTCCGTAGCAGAAATCGACCCGCTAATTTACCAAGTTGAAGCTGTTCAGTACAACGACAGCAAATTTGCTTATGTCGATAACGATCTTCCGATTGCCGTACCAAAAGATCGCTTTACCATTTCAAGCGCAACAGCACCAACAAATCTTTCGGCGGCACTGCGTTATTCCAATGGTCAAACATCAATTCGTGCAACATGGAAAGCACCACAAAGGAACGATGCGACCGATCTTTTGATTCGTGGTTACAGATACCAATGGCGCAAATCTGGCGATACCGAATGGTCTGAAATAGCGCAAACTGCAACAACTAAAGTTGAAATTCCACTTTCGTTGCATGTTTTTGGTAACAGCTATCAAGTCCGTGTCGCATCAACCAATCGCTTGGGCAGCCAATCTGACTGGCTTGTATATGATGTTGATGCGTTTGAAGCAATTCCAGATCTTTCAGACGCTGAGTACAACGCCGTCGTTCGCCACCAAAACCAACCAGACGGCACTCAACTGCTGATCGTTGATTCTGGTACGTGCCCAATTCCAGAGCGAGTTTCGGGTTATCGGTGCTGGGCCAAACCAATTGATGTGCCCACAGTCATCCCAGGTGTCAAAGAGCCTGATGCTGATGGCTGGTACTTCTTGGCCGATATTCCGTTGACGGGATATTACACGATTGCTTTCCACGCTCCAGGTGATTGGCAGATCCGTGTTGCATTTACAAGTTCAATTTTTGGCGAAAATCCAGCGGATTATCTGTACGACACGGTGGATCGTGAAAAGATCGTGCCGCCAACGCCAACAAATTTCAGTGTTGTTGAGAATTACAACGGCAGCGGCAAGCGGTTTAGCTGGCAAGTACCACTGACAGGGTACGGAAGTTGGGATCAAAACACAGTTGCCGATATTGTCGGCTATGAAGTGCGTTACAAACAGGGCGATCTTGTCAATAGCAGCCCATCTGAAACATGGGAAGCAGGCATTGAATTGGCATCTGGCGGATTACCCGCTCAGCAGCAGTGGTTTGAAACTGCTTTGTTTGACTCTGACCAGTGGGTCGTCATGGTTAAAACCGTTGACGCAACGCAATGGCGTTCAGATGACCCTGCATACATTCTTGTTAACATTACGGCACCGCCAATTAACAATGCAGTGCAAACGATTAACGCAAAAACGCAGGGTGCAGGAAACTGGCCAGGTGACTACGACAACTGCTCTGTTGTTTCTGGCGACTTGGTTCAAACCGATGCAACGCAAGACAGCACGTTTACATGGACATTTGACAACAACAATCTTGAAAGCGCACTGCTGCTAACAACAACGGCTGATGCAACCTATCAGCATCAAATTGCTGCATTGACCGGTGAAGCGATTGAAGTAACGCAAGAAGATGATTTTAACATTTTGCAAGAAAATGATGACAAGCTTTTGGCTGAACAGCGGTTTTACACCGAATCGGAACTTTCGGAAGGCGGTGTTTTGCATCCCTACGCGCCATACGAAAAACTACTTGCAGACTTGTATCGCGTCAGGACACTGTTCAAGAGTCCCGATGGCGGTTCAACTGCTGGAGAGATTACAGCATTAACGGCACAGCTTGATTACGCTGATGTGGTTGAAAAGATCAATGATGCCGCAATTTCCAGTGCTGGAACGGCGGTAAGTCTGACGAAAACATTCCGCAGCGTAGAAAGCGTTGCCATCACTGCACTACAAACAGGTGGCTCAACTGCTGTCACGGCAGTTATAGTGAGTAAAACGACCAGTGCTGTTACAGTGAAGTGTCTCGACTCATCTGGCAGCGCAGTTGCCGGTACTGTTGATCTCATCGTTACTGGGTACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
9542ac587aa3470acd6d2a6859b20507e4c03843d592b5a91722049cd096792f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7632
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Cyanophage KBS-S-2A Henn,M.R., Lennon,J., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank