Protein

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Genbank accession
QMV34172.1 [GenBank]
Protein name
tail spike receptor binding protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,96
Protein sequence
MNPQFAQPKGSTSKETNKDSIARKFGCKKSEVVYAKSGQSLSGYKVIYDKVSQRAYALPSNIGAVAVTSLVDGVLTHSGGTVDLGELAVLRGEFVALIEDFSDGFAIHTKNEMIRSNNSFYRWGGSLPKVVSSGLTIGNTGGVSGSAWIFVKNTASEKETYMSNWVSIGEDISGIMNDLLNAYDTIYLDIDVGLSSNVVNNLDGKRIIGNGNKINLLGNSFDTNKGAIELTGNYTEVSGVVFTTTTATVTPLRLGNTSYGSTDNTRRVGVRCNKCVFENTGFKGPNQGNLVVIGALYPEITYPRFVGVSRAGGNMEVLGCKGGYVSEGYAENGLLINFHGTSADGIGFPTTDFQFINCEGVMNSSVLGDVEGVVGGNNNIKFSRGCSGCKIIGGKFVSVSAGSFNGNDHVIAIQGCSNNTVEGVVVQMNNNGDYKSAFGISDHNVSLTDSYDNVIQNCFVQINTPGQYNRILQIQSNAGKSIRRNKLINVSFNCYNGSNTVDAVCEQTSTTSGLVSDTQILGCTGLGVTNVLLNRSGLASTAITYLQGNRIGTVMNSTVLNSGVVRIIDQPISVIVNGSGVLTSAVNCTVSKTSPGVWVINSFTSMNKLAVSFSSPGTGRYCVITKTSDYSWTITLYNPSAVVTEMEFNLIIG
Physico‐chemical
properties
protein length:653 AA
molecular weight: 69207,00800 Da
isoelectric point:6,92597
aromaticity:0,07963
hydropathy:-0,02466

Domains

Domains [InterPro]
IPR040775
RBD
100–151
IPR040775 DC_2141
QMV34172.1
1 653
Architecture
RBD
STR
RBD 100-151 | STR 152-653
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QMV34172.1
1 653
Domain Start End Length (AA) Confidence
N-terminal 1 172 172 0,9952
Central domain 173 553 382 0,9847
C-terminal 554 653 99 0,9647
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-172
Central
173-553
C-terminal
554-653

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_SentM_sal1
[NCBI] 		2743964 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella typhimurium
[NCBI] 		90371 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QMV34172.1 [NCBI]
Genbank nucleotide accession
MT499896.1 [NCBI]
CDS location
range 67848 -> 69809
strand +
CDS
ATGAATCCGCAATTTGCTCAACCAAAAGGTTCTACTTCAAAAGAAACGAATAAAGATAGCATCGCCCGTAAATTTGGGTGCAAAAAGTCGGAAGTCGTTTATGCGAAATCAGGGCAGTCCTTGTCTGGTTATAAAGTGATCTACGATAAGGTATCTCAACGTGCCTACGCTCTCCCTTCTAACATTGGTGCTGTAGCGGTCACCAGTTTGGTGGACGGTGTCCTCACGCACTCTGGAGGCACCGTAGATTTGGGAGAACTGGCCGTTTTGCGTGGGGAATTTGTTGCGTTAATAGAAGATTTTTCTGATGGATTTGCAATTCACACCAAAAATGAAATGATAAGAAGCAATAATTCCTTTTATCGTTGGGGTGGTTCTCTTCCAAAAGTTGTTTCTTCAGGGTTGACAATTGGGAACACAGGCGGAGTTTCTGGTTCAGCTTGGATTTTTGTAAAGAATACAGCTAGTGAAAAAGAAACTTACATGTCAAATTGGGTTTCTATTGGGGAAGATATTTCCGGCATAATGAATGACCTTTTAAATGCGTATGATACAATTTATTTGGATATTGATGTTGGGTTATCGAGTAATGTGGTGAATAATTTAGATGGTAAACGCATCATCGGAAATGGAAACAAGATCAATTTGTTGGGGAATTCTTTTGACACGAATAAAGGAGCTATAGAATTAACTGGAAATTATACTGAGGTTTCTGGTGTGGTGTTTACGACTACCACAGCGACAGTAACACCTTTGCGTTTAGGGAACACTTCTTACGGTTCAACCGATAATACTCGGCGTGTTGGTGTCCGGTGTAATAAATGCGTGTTTGAAAATACAGGGTTTAAAGGACCGAACCAAGGTAATTTGGTTGTTATAGGCGCACTATACCCAGAAATAACATACCCTCGGTTTGTTGGGGTTTCTCGTGCTGGGGGTAACATGGAAGTTCTTGGTTGTAAAGGTGGGTATGTTTCCGAAGGCTATGCAGAAAATGGTTTGCTAATCAATTTCCATGGGACATCCGCAGACGGGATCGGATTTCCAACGACTGATTTCCAATTCATTAACTGTGAAGGGGTAATGAATTCTTCTGTTTTAGGAGACGTAGAAGGAGTTGTGGGTGGAAATAACAATATCAAATTTTCTCGAGGATGTTCTGGGTGTAAAATAATTGGAGGGAAGTTTGTTTCCGTATCAGCGGGATCTTTTAATGGGAATGATCATGTTATAGCGATCCAGGGGTGCAGTAATAATACAGTTGAAGGCGTTGTTGTTCAGATGAACAATAACGGTGATTATAAATCTGCGTTTGGGATATCAGATCATAATGTTTCATTAACAGATAGTTATGACAATGTTATTCAAAATTGTTTTGTACAGATCAATACCCCAGGCCAATATAATCGGATATTGCAGATTCAGTCTAATGCCGGAAAATCAATACGGCGCAATAAATTGATAAATGTATCTTTTAATTGTTATAACGGAAGTAATACGGTTGATGCCGTTTGTGAGCAAACTAGCACCACTTCAGGTTTAGTGTCAGATACCCAAATATTGGGTTGTACTGGTCTGGGTGTTACGAATGTATTGTTGAACAGATCAGGGTTGGCATCTACTGCGATTACATATTTACAAGGGAACCGTATTGGAACTGTTATGAATTCAACCGTATTGAATTCTGGTGTTGTGAGGATTATTGACCAACCAATATCTGTAATTGTGAATGGTTCTGGTGTCCTTACTAGTGCCGTGAATTGTACGGTGTCTAAGACGTCGCCTGGTGTTTGGGTAATAAATTCTTTCACAAGTATGAATAAATTGGCTGTATCTTTTAGTTCTCCAGGTACTGGTAGATATTGTGTTATTACAAAAACCAGTGATTATTCGTGGACAATCACATTGTACAACCCATCAGCAGTTGTAACAGAAATGGAATTTAATCTTATAATCGGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9e34a7fa072d12d868da3ae9a1d32095872a5224bd2d5139d976a81c83887cb0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7710
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Identification and Characterization of Three Lytic Bacteriophages Specific for Salmonella enterica Typhimurium With Potential for Bio-control El-Arabi,T.F., Sharaf,A., Kourany,A.A. and Othman,B.A. 2025-02-08 — GenBank