Protein

View in Explore
Genbank accession
WEU70076.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,68
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MVQKLQDVETNINVSTVENGFIGANFYTEDDGSSYIRIAIKDNNEALNFNNTDMTPRLDLFSSDGSIFTNEPLDILVPEGGVIQYKVSDNVIKHAGRMDAKLFLANSKDSVHVANFYFTITDSGMTGPIGKEIHVDSLQDLVKNVMKENAIGLLDDDFKDKLENDLKVYMEENADTFKGEQGAQGAIGLQGPKGEPFRYEDFTPEQLANLKGERGVQGIPGEDGKPFTYSDFTQEQLELLKPNWTDTDWQSLPLVNGVAQAGIYNKPSYRLVSINNVNVIFIKGAISGVSMKEMAFAKFPKNIGDMIKDYKQYTKSSINTSQAIIYNITIAQGGDLKITFDPKYEVKSYDMYYIEGTIVL
Physico‐chemical
properties
protein length:360 AA
molecular weight: 40099,63280 Da
isoelectric point:4,62768
aromaticity:0,10000
hydropathy:-0,37750

Domains

Domains [InterPro]
DC_0885
STR
1–350
DC_0885
G3DSA:2.60.40.3350
ATT
8–126
G3DSA:2.60.40.3350
IPR018913
ATT
11–146
IPR018913
WEU70076.1
1 360
Architecture
ATT
STR
ATT 1-146 | STR 147-350 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage vB_SepS_BE21
[NCBI] 		3028897 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus epidermidis
[NCBI] 		1282 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WEU70076.1 [NCBI]
Genbank nucleotide accession
OQ355700.1 [NCBI]
CDS location
range 29923 -> 31005
strand -
CDS
ATGGTACAAAAATTACAAGATGTAGAAACAAATATTAATGTTAGTACTGTAGAAAATGGCTTTATAGGAGCTAATTTCTATACAGAAGACGACGGATCTTCATATATTCGCATTGCTATTAAAGATAACAACGAGGCCCTTAACTTCAACAACACGGATATGACACCTCGATTAGATTTATTTAGTTCAGATGGTTCTATATTTACAAATGAACCTTTAGACATCCTTGTTCCAGAAGGAGGGGTTATCCAATATAAGGTATCAGACAATGTTATTAAACATGCAGGTAGAATGGATGCAAAGTTATTTTTAGCTAATAGTAAAGATAGTGTGCATGTCGCTAACTTTTATTTCACTATCACAGACAGTGGAATGACTGGACCGATTGGTAAAGAAATTCATGTAGATTCGTTACAAGATTTAGTAAAAAATGTTATGAAAGAGAATGCTATAGGATTATTAGATGATGATTTTAAAGATAAGTTAGAAAACGATTTAAAAGTATATATGGAGGAAAATGCTGATACATTCAAAGGAGAACAGGGCGCTCAAGGCGCAATTGGTCTACAAGGACCTAAAGGAGAGCCTTTCCGATACGAAGATTTCACGCCAGAGCAACTCGCTAATTTGAAAGGAGAGCGGGGCGTACAAGGTATTCCTGGTGAAGATGGGAAACCATTCACATATAGTGATTTCACTCAAGAGCAGTTAGAGTTGTTAAAACCTAACTGGACGGACACAGATTGGCAATCACTTCCACTTGTTAATGGAGTTGCACAAGCCGGCATATATAACAAACCTTCTTATAGACTGGTTTCAATTAATAATGTTAACGTAATATTCATTAAAGGTGCAATAAGTGGCGTAAGTATGAAAGAAATGGCTTTTGCGAAATTCCCTAAAAACATTGGGGATATGATAAAAGATTATAAACAATACACGAAATCGAGTATTAATACGAGTCAAGCGATTATCTATAATATCACCATCGCTCAAGGTGGCGATTTAAAAATTACATTTGATCCTAAGTATGAAGTGAAGTCGTATGACATGTACTACATTGAAGGAACAATTGTTTTATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
67fef1fc304a43d81766ba505c1ba0a7c16ba7ea2e83f00de4dd37a462ca15d3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8497
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation of bacteriophages targeting S. epidermidis from the skin of LVAD patients Pitton,M. 2021 — GenBank