Protein

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Genbank accession
UPW39412.1 [GenBank]
Protein name
tail connector protein
RBP type
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MEKFMAKFGQGYVQTPFLSESNSVRFKLSIAGSCPLSTTNPYINFQDSPLGGQVFAVGLNVRIINPSSGAIVESKVYNFSTVNDATSNAFVAFMNSYAPGFIFAFVTNNKTNFPPEVLTWFTKAGSSVIPMAQPVLNIVDISYSAFYVSGKNAIALEHIKYGNKKSRADYSTPLEVVYDTIDDIGATGFPVRTFESTDTFLSTVGGTNNEVKRMPTTSLVTPLANYNLKPGDFLYTKFQMMADADLLAQGTTRLSIRFFKSPSTSPISFKDLNFDGTAGQWKIFEEYTKIPADADGFTIYCYRTAAAGQGGLRNIIFTEVSCNGSIPKAAEFGVNGIRVNYVSESLSPPDIMTFPTQSSTDTGKVFGQEFREASE
Physico‐chemical
properties
protein length:375 AA
molecular weight: 40929,69090 Da
isoelectric point:5,45276
aromaticity:0,12800
hydropathy:-0,09067

Domains

Domains [InterPro]
DC_0912
STR
1–375
DC_0912
PS52031
LEC
22–193
PS52031
IPR039477
STR
58–129
IPR039477
UPW39412.1
1 375
Architecture
STR
STR 1-375
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UPW39412.1
1 375
Domain Start End Length (AA) Confidence
N-terminal 1 293 293 0,1817
Central domain 294 364 72 0,6264
C-terminal 365 375 10 0,4471
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-293
Central
294-364
C-terminal
365-375

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoM_ESCO47
[NCBI] 		2918870 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UPW39412.1 [NCBI]
Genbank nucleotide accession
OM386662 [NCBI]
CDS location
range 103415 -> 104542
strand -
CDS
ATGGAAAAATTTATGGCTAAGTTTGGACAAGGATACGTCCAAACGCCATTTTTATCGGAAAGCAATTCAGTAAGATTTAAATTAAGTATAGCGGGTTCATGCCCGCTTTCAACTACAAACCCGTATATAAATTTTCAGGATAGTCCGCTCGGTGGTCAAGTTTTCGCAGTTGGATTAAATGTTCGCATTATAAATCCGTCGTCAGGTGCCATAGTAGAAAGTAAAGTTTATAATTTTTCTACTGTAAACGACGCAACTTCAAATGCTTTTGTTGCATTTATGAACTCTTACGCTCCCGGATTCATATTTGCTTTTGTGACAAATAATAAGACTAACTTCCCGCCTGAAGTTTTAACTTGGTTCACTAAAGCAGGTAGTTCAGTTATTCCTATGGCTCAACCGGTGTTAAATATCGTGGACATTTCATATTCCGCGTTTTATGTGTCAGGAAAGAACGCTATTGCTTTAGAGCATATAAAATATGGAAATAAAAAGTCTCGTGCTGATTATAGCACTCCGTTAGAAGTCGTTTATGATACAATTGATGATATAGGTGCTACCGGTTTCCCTGTTCGCACATTTGAATCGACGGATACATTTTTATCTACCGTTGGTGGAACTAATAATGAAGTTAAAAGGATGCCTACAACATCACTAGTGACTCCTCTTGCTAACTACAATTTAAAGCCTGGTGATTTTCTTTATACGAAATTCCAGATGATGGCTGACGCTGATTTGTTAGCTCAAGGAACCACAAGACTTTCTATACGTTTCTTTAAATCTCCTTCAACGTCTCCTATTTCATTTAAAGATTTAAACTTTGATGGAACAGCAGGACAATGGAAGATATTTGAAGAGTATACTAAAATTCCTGCTGATGCTGACGGGTTCACAATTTATTGTTATCGAACTGCGGCAGCCGGTCAAGGTGGATTACGAAATATTATATTCACTGAAGTTTCGTGTAATGGAAGTATACCGAAGGCCGCAGAATTTGGTGTAAATGGTATTCGTGTAAATTATGTTTCAGAATCTTTAAGTCCTCCAGATATTATGACGTTCCCTACCCAATCTTCAACTGATACGGGTAAAGTATTTGGTCAAGAATTTAGAGAAGCATCGGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c4f0e8e11176068aea6fb9f4795b554269598c4ef23073ea955e1fbabbc3179f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7085
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Avian Pathogenic Escherichia coli bacteriophages Nicolas,M., Trotereau,A. and Schouler,C. 2015-06 — GenBank