Protein

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Genbank accession
XVB83390.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MKDLYSMEYTELRNAPHFIFNGYHTRDFNVQNVQVDSGLAKDTFLATRNLTVERTRYSDKSYLLGFTEEPLKFKIRLLFDEHKFTLNNYRALKKVFYQPTYKEFKFDNEEESNLHIIMYAMLTGTSEATHNVINDGYIDLEFETNSSKKYSEIMEDEYDFSKSASEKILEEYTKEIGSIAQMEEKLARDLKQWVARTNYANIEEVAKDKNKDKLPDGWKLISGDKNNITIDSKGKMTFNNVHIRKRINPINNRNYYLRVNGSKGKIRIHENDYDIDTLGVHQFKYRRNLLGNSGTFDLDSSGDGIGEGWEKYGATGTFSIDKINEIQTISQGYLTTNVSIADGQKYILVAETSGDANIALRSGNSSVVKRSILPDLYCFVFEGKKELNSIVISKSGTVDATFSHIRIYAITDEEYNEINTSSSSNIRNKYPHFDLHPYFDIDYSGVQGYINYIDLWELNDLNKKKLDNGTPIEQIVGFNYDKYKAFLEKTKANIDVVLDDLMESFDKLNTVEGINFQKLYDKIVLLSQDFSREYASLDKGENMKNYQWDDVQPHFLNIKELSEKTAECLTEITEFINLNQHKIDTSSEIGNDLITVYNFGDDTVYPNFEIESTDGSDIMIRNNDTNEYTIISDNIAGERITLIGENEQITTSRPAPYFKYDAHDDTFIRLKTGQNILEFAGNYTLKITYQFVLL
Physico‐chemical
properties
protein length:694 AA
molecular weight: 80133,45170 Da
isoelectric point:5,00612
aromaticity:0,11671
hydropathy:-0,60375

Domains

Domains [InterPro]
IPR046688
ATT
15–150
IPR046688 DC_1533
IPR048276
RBD
590–689
IPR048276
XVB83390.1
1 694
Architecture
ATT
STR
ATT 15-150 | STR 516-694
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XVB83390.1
1 694
Domain Start End Length (AA) Confidence
N-terminal 1 216 216 0,8871
Central domain 217 595 380 0,6430
C-terminal 596 694 98 0,2672
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-216
Central
217-595
C-terminal
596-694

Taxonomy

  Name Taxonomy ID Lineage
Phage Mammaliicoccus phage phi6255
[NCBI] 		3414232 Viruses >
Host Mammaliicoccus sciuri
[NCBI] 		1296 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XVB83390.1 [NCBI]
Genbank nucleotide accession
PV389083 [NCBI]
CDS location
range 43679 -> 45763
strand -
CDS
ATGAAAGATTTATATAGTATGGAATATACGGAACTTCGTAACGCTCCACATTTCATCTTTAATGGATACCACACTCGTGATTTTAATGTACAAAATGTACAAGTTGATTCGGGATTAGCTAAGGATACATTCTTAGCTACCCGTAATTTAACTGTAGAAAGAACGAGATATAGTGACAAAAGTTATTTACTTGGGTTCACTGAGGAGCCATTAAAATTTAAAATTAGGTTACTATTTGATGAGCATAAGTTCACATTAAACAATTATAGAGCTCTAAAAAAAGTGTTTTATCAACCAACATATAAAGAGTTTAAATTTGATAATGAAGAAGAAAGTAACTTGCATATTATTATGTATGCCATGCTTACAGGTACATCTGAAGCTACACATAATGTAATAAATGATGGATATATAGACTTAGAGTTTGAAACAAATAGTTCAAAGAAATATTCTGAGATTATGGAAGACGAATATGATTTTAGCAAATCAGCTTCTGAAAAAATATTAGAAGAGTACACTAAAGAAATAGGTTCAATCGCTCAAATGGAAGAAAAATTAGCACGTGATTTAAAACAATGGGTTGCTAGAACCAATTACGCAAACATTGAAGAAGTTGCTAAAGATAAAAATAAAGATAAATTACCAGATGGTTGGAAATTAATATCAGGTGACAAAAATAACATTACAATTGATTCTAAAGGTAAGATGACATTTAATAATGTTCATATTAGAAAACGTATTAACCCTATTAACAACCGTAACTATTATTTAAGGGTTAACGGTAGTAAAGGTAAAATAAGAATTCATGAAAATGATTATGATATAGACACACTTGGTGTACATCAATTTAAATATCGTAGGAACCTTCTAGGAAACTCTGGCACATTTGATTTAGATAGCTCTGGTGATGGAATTGGAGAAGGATGGGAAAAATATGGTGCAACAGGTACTTTTTCAATAGATAAAATTAATGAAATTCAAACTATTTCTCAAGGATATTTAACAACAAATGTATCTATTGCTGATGGACAAAAATATATTTTAGTAGCTGAAACTTCGGGTGATGCAAATATTGCACTAAGGTCTGGAAACTCTAGTGTGGTAAAAAGGTCTATCCTTCCTGACTTATATTGTTTTGTTTTTGAAGGAAAAAAAGAACTGAATTCAATAGTAATTTCTAAATCTGGTACTGTTGATGCAACATTTAGTCATATTAGAATTTACGCTATTACAGATGAAGAATACAATGAAATAAATACTTCAAGTTCATCTAATATAAGAAACAAATACCCTCACTTTGACCTCCACCCATACTTCGATATAGATTACTCTGGTGTTCAAGGATATATTAATTATATTGACCTTTGGGAATTGAATGATTTAAATAAAAAGAAACTAGATAACGGAACTCCTATTGAACAAATTGTTGGTTTCAATTATGACAAGTATAAAGCATTCTTAGAAAAAACTAAGGCTAACATAGATGTTGTTCTTGATGATTTAATGGAATCGTTTGATAAACTCAATACAGTTGAAGGAATTAACTTCCAAAAACTTTATGATAAAATAGTTCTTTTATCACAAGATTTCAGTCGGGAATACGCGTCTCTAGACAAAGGCGAAAATATGAAAAACTACCAATGGGACGATGTTCAGCCACATTTTCTTAATATTAAAGAGCTTTCAGAGAAAACTGCTGAATGTTTAACTGAAATAACAGAATTTATAAATTTAAATCAACACAAGATAGATACCTCATCTGAAATAGGAAATGATTTAATAACTGTTTATAATTTTGGCGATGATACTGTCTACCCTAATTTTGAAATTGAGTCGACAGATGGTTCTGATATCATGATTAGAAATAATGATACAAATGAATATACAATCATTTCAGATAATATAGCTGGAGAGAGAATAACTCTTATAGGTGAAAATGAACAAATAACCACTTCTAGACCAGCACCTTATTTTAAATACGATGCACATGATGACACATTTATTAGGTTAAAAACTGGACAAAACATATTAGAATTTGCTGGCAATTATACATTAAAAATAACATATCAATTTGTTTTACTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9a4d9ed47432615e11bf731e77b0613f45a75224dcce42ec85e5beae5b9fd3a5
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8618
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterisation of phylogenetically distinct temperate phages from Kenyan Mammaliicoccus sciuri Cherbuin,J.D.R. 2025-12-01 — GenBank