Protein

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Genbank accession
XEO41428.1 [GenBank]
Protein name
short tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
Protein sequence
MATPLNNTYKHIADAAQYISFNPTGTSFPATVVDVQAALALTSPTTYATATTAGVVKIATKDEVLAGVDNTKMVTPFTLNERMKYPDATTTVKGLVTLATNAEAQAGAITTNKAINPASLKYTLDWWWNNKLASESAQGVIKLSTQQAAQAGVDDSTAMTPLKVKQAIAAATAQIPQPVQATETAPGIVQLATIGQAQQGTLRDGYAISPYTLQRITGSLTTRGLVQAATLAQANTGTDDTLYISAKGFKTYNATTTNYGTVKLTDTLGTTGAGVVLSSNAKVLSTVSTGTQTVTGTVNFTGTLQLQGQPVANQKFVKDSIPVGAMMEWFGDSAPPGGMWALCDGGAESKAARPELFAAIGYKFGGSGDTFYRPDMRGLYARGAGRGKDIIANTGYDEFNKPLLGNGVDGGVVGQVQKQQIREHKHIVSWGETRQETPNFPFGGTQLSKYWGTNGREDHDNGWMFSNDGTEFEPASVRTEYSTVNSKELIGTETRPWSMSVNYIIKVA
Physico‐chemical
properties
protein length:508 AA
molecular weight: 53867,74760 Da
isoelectric point:6,92296
aromaticity:0,08071
hydropathy:-0,26024

Domains

Domains [InterPro]
DC_0176
STR
2–425
DC_0176 IPR027448
IPR037053
ATT
311–377
IPR037053 IPR044916
SSF88874
STR
317–507
SSF88874
IPR011083
ATT
324–379
IPR011083 IPR027448
XEO41428.1
1 508
Architecture
STR
ATT
STR
STR 2-310 | ATT 311-379 | STR 380-507 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage vB_AbaM_DLP3
[NCBI] 		3243735 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Acinetobacter baumannii AB5075
[NCBI] 		1116234 Pseudomonadota > Gammaproteobacteria > Moraxellales > Moraxellaceae > Acinetobacter > Acinetobacter baumannii

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XEO41428.1 [NCBI]
Genbank nucleotide accession
PQ034586.1 [NCBI]
CDS location
range 93933 -> 95459
strand +
CDS
ATGGCGACACCACTTAATAATACATACAAACACATTGCAGATGCAGCACAATATATCTCATTCAATCCAACAGGTACAAGTTTTCCTGCAACTGTAGTAGATGTTCAAGCTGCATTGGCTCTTACTTCTCCTACTACATACGCCACTGCCACTACCGCAGGTGTTGTCAAAATTGCTACCAAAGATGAAGTTTTAGCAGGGGTTGATAACACAAAAATGGTGACACCATTCACTCTAAATGAGAGAATGAAATATCCTGATGCCACTACAACAGTTAAAGGGCTTGTAACTTTAGCTACTAATGCAGAGGCTCAAGCCGGAGCCATAACTACAAATAAAGCTATCAATCCGGCAAGTTTGAAATACACACTTGATTGGTGGTGGAACAATAAATTAGCATCTGAATCTGCACAAGGTGTTATTAAATTATCTACACAACAAGCCGCACAAGCCGGAGTAGATGATTCTACCGCAATGACACCATTAAAAGTCAAACAAGCTATTGCAGCTGCCACAGCACAAATTCCACAACCTGTACAAGCTACTGAGACTGCACCTGGTATAGTTCAACTTGCAACAATTGGGCAAGCACAACAAGGTACTTTAAGAGATGGATATGCAATCTCGCCATATACTCTTCAACGTATTACAGGAAGTCTTACAACACGCGGATTAGTCCAAGCTGCAACTTTAGCACAAGCTAACACGGGGACGGATGACACCTTATACATTTCCGCTAAAGGATTCAAAACATATAATGCTACCACTACAAATTATGGTACAGTTAAATTAACCGATACACTTGGGACCACCGGTGCTGGTGTTGTGTTAAGTTCTAATGCTAAAGTATTAAGCACTGTATCTACCGGTACACAAACTGTCACAGGCACTGTTAATTTTACTGGAACACTTCAACTTCAAGGACAACCAGTAGCCAATCAAAAATTTGTTAAAGATTCTATTCCGGTTGGCGCCATGATGGAATGGTTCGGTGATTCAGCGCCTCCTGGAGGTATGTGGGCGTTATGCGACGGCGGAGCCGAATCAAAGGCTGCACGCCCAGAGCTTTTTGCGGCTATTGGCTATAAATTCGGCGGTTCTGGTGATACATTCTATCGCCCAGATATGAGAGGTCTTTATGCTCGTGGTGCTGGTCGTGGTAAAGACATCATTGCAAACACCGGGTATGATGAGTTCAATAAACCTCTATTAGGTAATGGTGTAGATGGCGGTGTTGTTGGTCAAGTTCAAAAACAACAAATTCGCGAACATAAACACATTGTTTCTTGGGGCGAGACTCGCCAAGAGACACCTAACTTCCCATTTGGTGGCACACAGTTAAGTAAATATTGGGGGACCAATGGGCGTGAAGATCATGATAATGGTTGGATGTTCTCTAACGATGGAACAGAATTTGAACCTGCATCAGTGCGGACCGAATATTCTACTGTCAACTCTAAAGAGTTAATTGGAACAGAGACACGCCCATGGAGCATGTCAGTAAACTATATTATTAAGGTGGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
217cbdc97ea23cb32775b20f8bef899f943ad890355ee2593416d730052c9dcd
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6922
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of Acinetobacter phages for therapeutic use Peters,D.L. 2022-09-29 — GenBank