Protein

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Genbank accession
UVK85892.1 [GenBank]
Protein name
non-contractile tail tubular protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,55
Protein sequence
MALISQSVKNLKGGISQQPDILRFPEQGAEQINGWSSETEGLQKRPPFIFTKTIGDAGFLGAAPLVHLINRDSVEQYYVVFTGSGVKVFDLNGREYAVHGDTSYANCANPRDDLRMVTVADYTFVVNRSKVVQANKDPIYTIREDGECLINIRGGQYGRTFTIRLNGISASYKIADGANAPEVEQTDAQWLVKKMAQLLREGGANTWGWTVNEGAGYIHVVSRGDEPIWKVEVEDGYGGQLMSAVMHTSQSFSKLPAEAPNGYSVQIVGDTSKTSDAFYVQYDAARKVWKEVAGWGVQKGLNNGTMPHALIRQSDGSFKMEALPWDERKCGDMNTNPDPSIVDQKINDVFFFRNRLGFLAGENIVMSRTSKYFSLFPASVANLSDDDPIDVAVSHNRISTLKYAVPFSEELLLWSDQAQFVLSASGILSPKSVELNLTTEFDVSDKARPYGIGRGVYFASPRASYTSINRYYAVQDVSSVKSAEDMSAHVPSYIPNGVFSIRGSGTENFVSVLSANAPSKIFMYKFLYLNEGNVQQSWSHWELGSNVTVLACDSIGSTMYLLLRNQSHTWMARAHFTKNSIDYLDEPYRIYIDNKLEITIPGGSYNDDTYETVIYPGQFYGMKTYRGKYYIVAMDGKVTWFDEPQGGWPNGEPRLALSGNREGEKVYIGQAINFRYVFSKFLIKKAADDGSTATEDIGRLQLRRAWVNYEGSGAFVVEVENTSRLFSYDMAGARLGSNALRAGGLNVGTGQFRFPVSGNAKLNEVRIISDHTTPLNVIGCGWEGNYLRRSSGI
Physico‐chemical
properties
protein length:793 AA
molecular weight: 87926,67520 Da
isoelectric point:5,89616
aromaticity:0,11349
hydropathy:-0,31475

Domains

Domains [InterPro]
IPR058003
TTP
1–793
IPR058003
UVK85892.1
1 793
Architecture
TTP
TTP 1-793
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UVK85892.1
1 793
Domain Start End Length (AA) Confidence
N-terminal 1 137 137 0,9930
Central domain 138 346 210 0,2780
C-terminal 347 793 446 0,2026
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-137
Central
138-346
C-terminal
347-793

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage JSS1
[NCBI] 		2972748 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Berlinvirus
Host Salmonella enterica
[NCBI] 		28901 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UVK85892.1 [NCBI]
Genbank nucleotide accession
OP185508 [NCBI]
CDS location
range 24591 -> 26972
strand +
CDS
ATGGCTCTTATTTCACAATCCGTCAAGAACCTGAAAGGCGGTATCAGTCAACAACCAGACATCTTAAGGTTCCCCGAACAGGGTGCCGAACAGATTAATGGCTGGTCGTCTGAAACTGAAGGTCTCCAGAAGAGGCCACCTTTCATCTTTACGAAAACTATTGGTGACGCAGGGTTCCTTGGCGCTGCACCTTTAGTTCACCTAATCAACCGCGATAGCGTCGAACAGTATTACGTTGTGTTCACTGGAAGCGGTGTTAAGGTGTTTGACCTGAATGGGCGCGAGTACGCTGTTCACGGAGACACCTCTTATGCTAACTGTGCGAACCCTCGTGATGACTTGAGGATGGTCACTGTGGCCGACTACACGTTCGTAGTAAACCGCTCTAAGGTTGTTCAAGCCAACAAAGACCCTATCTACACTATTCGAGAAGACGGCGAGTGTCTCATTAACATCCGTGGTGGTCAGTATGGTCGTACCTTTACGATTAGACTGAATGGTATCTCTGCATCCTATAAGATTGCTGATGGTGCCAATGCCCCTGAAGTTGAACAGACGGATGCACAATGGCTCGTTAAGAAGATGGCACAGCTACTTCGAGAAGGAGGCGCAAATACTTGGGGATGGACTGTCAATGAGGGTGCTGGGTATATCCACGTTGTCTCTCGTGGTGATGAACCTATCTGGAAGGTAGAAGTAGAGGACGGCTATGGAGGTCAGTTGATGTCTGCTGTAATGCACACCAGTCAGTCATTCAGTAAGTTACCCGCTGAGGCTCCTAATGGCTACTCTGTGCAAATCGTAGGGGACACCTCTAAGACTTCCGATGCGTTCTACGTTCAGTATGATGCAGCACGTAAAGTATGGAAGGAAGTTGCAGGGTGGGGAGTACAGAAGGGACTCAACAACGGCACGATGCCCCATGCTCTGATTCGTCAGTCCGATGGTTCCTTTAAGATGGAAGCATTGCCATGGGATGAACGCAAGTGTGGCGATATGAACACCAACCCCGACCCATCAATCGTAGACCAGAAGATTAATGATGTGTTCTTCTTTCGCAACCGATTAGGGTTTCTTGCTGGTGAAAACATTGTGATGTCTCGTACCTCCAAGTATTTCTCACTGTTCCCTGCGTCGGTTGCCAACCTATCAGATGATGACCCAATTGACGTTGCCGTATCACACAACCGAATCAGTACGCTTAAATATGCTGTACCGTTCTCCGAAGAGTTGCTCCTATGGTCTGACCAAGCACAGTTCGTACTGTCTGCCTCTGGTATCCTCTCACCGAAGTCAGTTGAGTTGAACCTAACTACTGAGTTTGATGTGTCCGACAAAGCTCGTCCATACGGTATCGGTCGTGGTGTATACTTTGCGTCTCCACGCGCTTCCTATACGTCCATCAACCGTTACTATGCGGTACAGGATGTTAGCTCCGTGAAGTCTGCGGAGGACATGAGTGCTCACGTTCCTAGCTACATTCCTAATGGCGTGTTCTCCATTCGAGGCTCTGGCACTGAGAACTTCGTTTCGGTGTTATCTGCCAACGCCCCAAGCAAAATCTTCATGTACAAATTTCTGTACTTGAATGAGGGAAACGTGCAACAGTCGTGGTCTCATTGGGAACTAGGGAGTAACGTAACTGTATTGGCTTGTGATTCTATTGGTTCCACCATGTACCTTCTGTTACGCAACCAGTCCCATACGTGGATGGCACGGGCACACTTCACGAAGAACTCCATCGACTACCTAGATGAGCCTTATCGAATCTACATAGACAACAAGCTGGAAATCACCATCCCCGGTGGCTCCTATAATGATGACACCTACGAGACAGTAATATATCCCGGTCAGTTCTACGGAATGAAGACCTATCGTGGTAAGTATTACATCGTTGCGATGGATGGTAAGGTGACGTGGTTCGATGAACCCCAAGGTGGCTGGCCTAACGGGGAACCTCGCTTGGCGCTTAGTGGGAACCGAGAAGGTGAAAAGGTATACATTGGACAGGCAATCAACTTCCGATATGTATTCTCTAAGTTCCTCATCAAGAAGGCAGCGGATGATGGCTCAACGGCTACCGAGGACATTGGTCGCTTGCAGCTTCGCCGCGCATGGGTCAACTATGAGGGTTCTGGTGCGTTCGTTGTGGAAGTTGAGAACACCTCACGGCTTTTCAGCTATGACATGGCAGGTGCTAGATTGGGTTCCAACGCTTTACGCGCTGGTGGACTCAACGTTGGTACTGGTCAGTTCCGATTCCCTGTGTCCGGCAATGCCAAGTTGAACGAGGTGCGTATCATCTCTGACCACACTACACCACTTAACGTGATTGGATGTGGATGGGAAGGAAACTACCTGCGTCGTTCTTCTGGTATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b5f8ac98e66305774c3aae06324a29190267037a9a4682a320eee1ae43c74786
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3183
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Insights into the inhibition of type I phosphorothioation-dependented restriction-modification system by a multifunctional protein Gp0.7 Jiang,S., Chen,C. and Du,X. 2023-02-14 — GenBank