Protein

View in Explore
Genbank accession
XTJ58878.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 0,93
TSP
Evidence RBPdetect
Probability 0,75
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MADQNLKQIQFKRTSTENKAPGADIVARGEIALNTHGRTLAIYTKDEADNVVQLAGKGVPFLDTAGNLNVDGTTTLKDNVTISPNKAINFEASDLSGALVRHITGKCANNDGWYIGAGGASDQGFLEIGTYDNGNEPIYFVQRTGGSAQAEVRRLALLDGFGDTSIPGDLRLTNKTVKISNGSTLTLEMGVGANDAYIKNLRGTGVLQLTNDSNLTFRNSQVYYAMNGRGPGKSGTLLTNVENNRQAWQYTISAATAGTPRWVKVATIKHPGDASSQLDLMITGGIDSGHGRHYVDFITLSGRNLTSWSTNNLDNWVEWRRVGSPDKGKIPEYYVVKNDAATDSEASFDFYAKVPRYGNGLYVTVLNTAGYNGQDSGKVIIYETNQDTGGYGPAGSILVSMKQIFDSYAKPDFGDTTGTLPVNRGGTGATSAGAARNNLGLGTAAVRDVGESNGNVMEVGAYGLGGNGGKSIENITSNADMLTRLKAYGGTFWRGVTKSGVSVQNGLYSHGSGIFMNAGDTMSAINIDYASAKVRVYAANDRSLAEGNVRYNELYGTANKPSKADVGLGNLTNDTQVKKAGDTMTGDLAAPNLHASGTGTASVYVNAGSGNAHVWFRTNANERGVIWATPNTADLGQINIRAKTTGGVSAGDFSFRSDGRFDVPVAVKVGGAAMLTKDGNITSGSMFGGNLNNYLTSIKNDITAGDNKQVSKTGDTMTGNLTINANLKVENPNGTMADFGSENSDKYSRITLARKVGSGAAVAMLKVTPEGHVQFGYQTAVSTPAPSKYILVKSSGLEVEGDLVFNQTYSGAEEAVDISDKTIDLNSLIIRRSDLGTRQLYKCVSSGGGSKITNKPTSDGNFVLEVLSLRKVSDTDWSCKQTFTTKNGGVEGTYIRYGQNGSWSAWKEVVSGVQPINLGGTGATSAASARNNLGVGEGQTVKFGNLVTTDLTANGNARLVGRLNLGSTSATGVLRANESGAVVLGSSSGQNIHIRAGSPDTSSGETRFEPNGNVLVGGVLTSSGSLQVNGEAAMSRSLIVSQNIKNTNDNSFILMGKDSDLGFVKKSNSGAKLVFASGKSFVVAKSSATAIANPASETYTDVFKVDADGNQTVYGNSAVSRALTVSSTATINGVINANGGIIVPTTKYVQIADAPTQNNQAANKKYVDDKVASAISNAGDTYLPLAGGTVTGNLDVTGTRLKTWQLEVDGKSTLRGGLDVSSSLKVSSGNLVAADTTNAGGLFAKNGNVYCDAGSAGTNSNYWFRDSAGNVRGVIWSNGQNGDMIIRNQSGRELVFRNDGYLQLAHLAPGNTDNANTVNGIRLQRGDTIFDSFNAWQSGEYVRAGWHFYNAAGVDQWLALTDTGVKIWGSAANLRVEGVGNFWDVEIRSDRRVKSNIAKIDNALDKVSKLSGNVYDLQLPNGDTKPSAGLIAQEVQEVLPEAVTTDNDKDALLRLNYNAVIALLVESVKELKAEIEELKSK
Physico‐chemical
properties
protein length:1481 AA
molecular weight: 155977,14510 Da
isoelectric point:6,90335
aromaticity:0,07022
hydropathy:-0,31884

Domains

Domains [InterPro]
DC_1942
ATT
4–621
DC_1942 cd19958 DC_0246
DC_1159
STR
450–1051
DC_1159 IPR030392
IPR030392
CHP
1389–1444
IPR030392 Coil
XTJ58878.1
1 1481
Architecture
ATT
STR
RBD
ATT 4-621 | STR 622-1051 | RBD 1082-1481
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XTJ58878.1
1 1481
Domain Start End Length (AA) Confidence
N-terminal 1 224 224 0,1242
Central domain 225 433 210 0,2548
C-terminal 434 1481 1047 0,6646
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-224
Central
225-433
C-terminal
434-1481

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage 15882-6-5
[NCBI] 		3373947 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XTJ58878.1 [NCBI]
Genbank nucleotide accession
PQ537381.1 [NCBI]
CDS location
range 57472 -> 61917
strand +
CDS
ATGGCCGATCAAAACTTAAAACAAATACAATTTAAAAGAACTAGCACAGAGAATAAAGCACCAGGTGCAGATATCGTAGCCCGTGGCGAAATCGCGTTGAATACCCATGGGCGTACTCTCGCTATCTACACCAAAGATGAAGCCGATAACGTTGTTCAGCTTGCAGGTAAAGGTGTTCCTTTCTTAGATACTGCAGGTAATCTTAATGTTGATGGAACTACTACGTTAAAAGACAATGTAACCATTTCTCCGAATAAAGCGATCAATTTTGAAGCTTCTGATTTAAGTGGAGCATTAGTACGTCATATCACCGGTAAGTGTGCTAATAACGATGGCTGGTACATTGGAGCTGGTGGCGCATCTGACCAGGGATTTCTTGAAATCGGTACGTATGATAACGGAAATGAACCTATCTATTTTGTTCAAAGAACTGGTGGATCGGCGCAAGCTGAAGTTCGTCGTTTAGCATTATTAGATGGGTTTGGCGATACCTCTATACCTGGGGACCTTCGTTTAACTAATAAAACGGTAAAAATTTCAAACGGAAGCACTCTTACTTTGGAAATGGGTGTAGGCGCTAATGACGCGTACATTAAAAACCTGAGAGGAACCGGTGTTCTTCAATTAACTAATGACAGCAATTTAACGTTCAGAAATTCCCAGGTTTATTATGCCATGAACGGAAGAGGTCCTGGTAAATCCGGTACTCTTCTGACGAATGTAGAAAACAATCGTCAAGCCTGGCAATATACTATTTCTGCTGCAACTGCTGGAACTCCACGTTGGGTTAAAGTAGCTACAATTAAACACCCAGGAGATGCGTCTTCACAGTTAGATTTAATGATTACTGGTGGCATTGATTCTGGGCACGGAAGACATTATGTTGATTTTATCACGTTATCAGGACGAAATTTAACATCTTGGAGCACTAACAATTTAGATAACTGGGTTGAATGGCGTCGAGTTGGTTCTCCTGATAAAGGAAAGATTCCAGAGTATTACGTTGTTAAAAATGATGCTGCTACAGATTCAGAGGCTTCATTTGATTTTTACGCTAAAGTTCCTCGATACGGCAATGGGCTTTATGTTACAGTGCTAAACACTGCTGGATACAACGGCCAAGATAGCGGTAAAGTAATTATCTATGAAACCAACCAAGACACTGGTGGATATGGACCAGCTGGAAGTATTCTTGTTTCAATGAAACAGATTTTTGACAGTTACGCAAAACCAGATTTCGGCGATACTACGGGTACTCTTCCAGTTAACCGTGGTGGTACAGGTGCTACTAGCGCAGGAGCAGCTCGTAATAACTTAGGTCTTGGTACTGCTGCTGTTCGCGACGTTGGTGAATCTAACGGAAACGTGATGGAAGTTGGTGCTTATGGCTTAGGCGGTAATGGCGGTAAATCAATCGAAAACATTACCTCTAATGCTGATATGTTGACCCGTTTAAAAGCATATGGTGGTACTTTCTGGCGTGGTGTTACTAAATCTGGTGTTAGTGTTCAAAATGGTCTTTATAGCCATGGCTCCGGTATTTTTATGAATGCTGGCGATACCATGTCAGCTATTAATATCGACTACGCCAGCGCTAAAGTTCGCGTATACGCAGCTAACGACAGAAGTCTTGCTGAGGGAAATGTTAGATACAACGAACTTTATGGTACAGCAAATAAGCCATCTAAGGCTGATGTCGGACTTGGTAATCTGACAAACGATACCCAAGTTAAGAAAGCTGGCGACACCATGACCGGTGATTTAGCTGCACCTAATTTACATGCTTCCGGCACCGGTACTGCATCAGTGTATGTTAATGCAGGAAGCGGAAATGCTCATGTATGGTTTAGAACAAACGCCAATGAACGCGGTGTAATTTGGGCAACTCCAAATACAGCGGATTTAGGACAAATTAATATTCGCGCAAAAACTACTGGAGGTGTTTCTGCTGGTGATTTTAGCTTCCGTTCTGACGGTCGATTTGATGTTCCTGTAGCAGTTAAAGTCGGTGGAGCAGCAATGCTGACTAAAGACGGGAATATTACCTCTGGTTCGATGTTTGGTGGTAACCTTAACAACTATTTGACTTCCATTAAAAACGACATCACTGCTGGCGATAATAAGCAAGTAAGTAAAACTGGCGACACAATGACCGGTAACTTGACTATTAACGCTAACTTAAAAGTCGAAAACCCTAATGGAACAATGGCTGATTTTGGTTCAGAGAATTCGGATAAGTATAGCAGAATAACTCTTGCTCGCAAAGTTGGTAGCGGTGCTGCCGTAGCAATGCTTAAAGTTACTCCTGAAGGACACGTGCAATTTGGTTATCAAACTGCAGTTTCTACTCCAGCTCCTAGTAAATATATTCTAGTTAAATCCAGCGGTCTTGAGGTAGAAGGGGATTTAGTTTTTAATCAGACATATAGCGGCGCTGAAGAGGCAGTTGATATTTCCGATAAGACTATCGACCTTAATAGTCTGATTATTAGACGATCAGATTTAGGTACTCGTCAGTTATATAAATGCGTATCTTCTGGCGGTGGTTCTAAGATAACAAACAAACCTACATCTGATGGTAACTTTGTTCTTGAAGTTCTGTCTTTACGCAAGGTTTCTGATACCGATTGGTCATGTAAGCAGACCTTTACTACAAAGAACGGCGGTGTTGAAGGCACATATATCCGCTACGGACAAAATGGTTCATGGTCTGCATGGAAAGAAGTTGTTTCTGGTGTTCAGCCAATTAATTTAGGTGGTACTGGAGCAACTTCTGCAGCTTCTGCTCGTAACAACCTCGGTGTTGGTGAAGGACAAACTGTAAAATTCGGTAATTTAGTTACAACCGATTTAACCGCAAACGGAAACGCTAGATTAGTCGGAAGACTGAACCTTGGTTCTACTTCCGCAACCGGTGTATTACGGGCTAATGAATCTGGCGCAGTTGTTTTAGGTTCTTCTAGTGGTCAAAACATCCACATCAGAGCAGGAAGCCCAGATACTTCTTCTGGTGAAACCCGCTTTGAGCCAAATGGAAACGTTTTAGTTGGCGGAGTTCTGACGTCTTCAGGAAGCTTACAAGTAAATGGCGAAGCTGCGATGAGCAGAAGCTTGATCGTTTCTCAAAACATAAAGAATACTAACGATAACAGTTTTATTCTGATGGGGAAAGATTCTGATTTAGGTTTCGTTAAAAAATCTAACTCAGGCGCTAAGCTGGTATTTGCTTCAGGAAAATCATTTGTTGTTGCTAAATCATCAGCAACTGCCATAGCTAATCCAGCTTCGGAAACTTACACTGATGTGTTTAAAGTTGACGCAGATGGAAACCAAACAGTTTATGGAAACTCAGCAGTTTCTAGAGCTTTGACTGTATCAAGTACAGCAACTATTAATGGGGTTATTAATGCCAACGGCGGTATTATTGTTCCTACTACCAAGTATGTGCAAATTGCCGATGCTCCTACACAGAATAACCAAGCTGCCAACAAGAAATATGTTGATGATAAGGTTGCTTCTGCTATTAGTAACGCTGGCGATACTTATCTTCCATTAGCCGGTGGTACTGTAACTGGTAACCTTGACGTAACTGGCACCAGATTAAAAACATGGCAGTTAGAAGTTGATGGCAAAAGTACTCTAAGAGGCGGGTTAGATGTTAGTAGCAGTCTTAAAGTTTCTAGCGGAAACTTAGTCGCCGCTGACACAACCAATGCTGGTGGTCTTTTTGCTAAAAACGGTAATGTTTACTGTGATGCAGGTTCAGCTGGTACAAACTCTAACTACTGGTTCCGTGATTCTGCTGGAAATGTCAGAGGTGTTATTTGGTCAAATGGTCAAAACGGTGACATGATTATCCGTAACCAAAGTGGCCGAGAGCTTGTATTCAGAAATGATGGATATCTGCAATTAGCCCACTTAGCACCAGGAAACACAGATAATGCAAACACCGTAAATGGAATACGTTTACAGCGCGGTGATACGATTTTCGATAGCTTTAACGCATGGCAGTCGGGTGAATATGTTCGCGCTGGATGGCATTTCTATAACGCCGCTGGAGTTGACCAGTGGTTAGCACTTACAGATACTGGTGTAAAAATCTGGGGTAGTGCTGCTAATCTACGCGTTGAAGGTGTTGGTAATTTCTGGGACGTTGAAATTCGTTCTGACCGTCGTGTGAAATCAAATATTGCTAAGATTGATAACGCTCTTGATAAAGTGTCGAAGCTATCTGGTAATGTTTATGATTTACAGCTTCCAAATGGTGATACTAAACCATCGGCTGGCCTTATCGCACAAGAAGTGCAGGAAGTTCTTCCTGAAGCAGTTACAACTGATAACGATAAAGATGCATTACTTCGTTTAAACTATAATGCAGTAATTGCGTTATTAGTCGAATCTGTTAAAGAGCTTAAAGCAGAAATTGAAGAACTTAAATCTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5e7ece1d5ab5bc7c39b3086477f097905271aaf7b238a238e36f649096d6539d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5009
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Phage training: Klebsiella pneumoniae Burke,K.A., Filippov,A.A., Nikolich,M.P. and Peters,T.L. 1997-09 — GenBank