Protein

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Genbank accession
UQT03066.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MPISPIKYTKISELPKKAVSENDKFTINTKDSKLTQTSIASLYDIREGIYFSNAASTVQEGLASVDNGESFFVYENSAKFAVLQYVKTAGSPSPVLGVDGKQRRFPTYLSIQAGIDITRELGFGVVGMVDNFARLRTIKPEYSGQRIILAGYVTGSSLGGGEFISNLSDLADNGGSVASGTGYHWKRNKTSFSLEDFGGGQADDTIAMRAAQKAQVGPISLSPGKTYYYSSAVRHYSGGGWIGNGATIKFKGNGNKIPFITSPTTAAGVANDITNGTTGISGLVFRDLTIDVDYTDTTGALGFEFAENTLDNWSDCTFSSVVFKNGKFDNLGLQSGSSRNTFYRCSFLSAGEDSVTVRGGCNETQFIECTVANSAQVAHRDGTYYGDGIVNKGRNTLVKSCRFINIGNGKKGAGIANNAEDTKNADEASYGTYLNNYFINCYGGFGFGTVNPDFIAAKDLIKGIKAIGNVFENTLRTVIGIRDLYQPVLLDNVVTTQTTGNVTAVEITNCSNFQFTGRVTDVAGSALIITNSSGSIDLVAENVSTTKTLNGVNITDSNRVTGKIRLINGQRRGVTISNCNNLDLDFYIESPAQDAFEAVNCRYSDMDVKLVNIPEHGMTLNGLIESNVSFNINDAGVKTAGTYYPIRLLGVRNSILTGVSSSTGAVKPLYDITSDANNANVLITNSRLAAGSTGKVQVGSGSTITQNNII
Physico‐chemical
properties
protein length:710 AA
molecular weight: 75669,54100 Da
isoelectric point:6,21133
aromaticity:0,08873
hydropathy:-0,16746

Domains

Domains [InterPro]
DC_1164
ATT
5–125
DC_1164 IPR011050 DC_1084
DC_0717
ATT
107–222
DC_0717
IPR012334
STR
197–518
IPR012334
UQT03066.1
1 710
Architecture
ATT
STR
RBD
ATT 5-222 | STR 223-521 | RBD 528-710
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UQT03066.1
1 710
Domain Start End Length (AA) Confidence
N-terminal 1 205 205 0,9942
Central domain 206 699 495 0,9981
C-terminal 700 710 10 0,2233
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-205
Central
206-699
C-terminal
700-710

Taxonomy

  Name Taxonomy ID Lineage
Phage Serratia phage vB_SmaS-Totoro
[NCBI] 		2943840 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Serratia marcescens
[NCBI] 		615 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UQT03066.1 [NCBI]
Genbank nucleotide accession
ON287372.1 [NCBI]
CDS location
range 133823 -> 135955
strand -
CDS
ATGCCAATCTCCCCAATTAAATACACTAAGATTTCAGAGTTACCAAAAAAGGCTGTATCGGAGAACGATAAGTTTACGATCAACACGAAAGACTCTAAACTTACTCAGACCAGCATCGCTTCATTGTACGACATTCGTGAAGGTATTTACTTTAGCAATGCGGCCAGTACCGTACAAGAAGGATTGGCTTCTGTAGACAATGGCGAGTCATTCTTCGTTTATGAGAACTCCGCAAAGTTTGCCGTATTGCAGTACGTTAAAACTGCTGGCTCGCCTTCTCCCGTTTTAGGGGTAGATGGTAAACAACGTCGGTTCCCTACCTACCTCTCTATCCAAGCCGGGATTGACATCACTCGTGAGTTAGGGTTCGGTGTTGTAGGCATGGTGGATAATTTCGCCAGATTACGTACTATTAAACCAGAGTACTCGGGTCAGCGAATCATCCTGGCCGGTTATGTTACGGGTAGCTCTTTGGGTGGTGGCGAATTTATCAGTAATTTGAGTGACTTAGCCGATAATGGCGGTAGTGTTGCTTCTGGTACTGGCTACCACTGGAAACGAAATAAAACTTCATTCTCCCTTGAAGATTTCGGTGGCGGCCAAGCTGATGATACCATTGCCATGCGTGCTGCTCAGAAAGCCCAAGTAGGGCCGATTTCATTATCCCCAGGTAAGACTTATTATTACAGCTCGGCTGTACGTCATTACTCAGGTGGTGGTTGGATTGGCAATGGAGCTACCATCAAGTTTAAAGGTAATGGGAATAAAATCCCATTCATTACTTCTCCGACTACCGCAGCCGGCGTAGCTAATGATATAACAAATGGCACAACGGGTATTAGCGGGTTAGTTTTCCGTGACCTAACTATTGATGTCGACTACACCGATACCACCGGTGCATTAGGCTTCGAGTTTGCTGAGAATACACTGGATAACTGGAGTGACTGTACGTTCAGTTCCGTAGTATTCAAGAACGGTAAGTTCGATAATCTCGGGCTGCAATCTGGCTCGTCCCGTAATACGTTCTATCGTTGTTCATTCCTGTCAGCTGGAGAGGATTCAGTAACTGTACGCGGTGGTTGTAACGAGACTCAGTTCATCGAGTGTACTGTTGCTAACAGTGCGCAGGTAGCTCACCGTGACGGTACCTACTACGGCGACGGGATTGTTAACAAAGGCCGTAATACCTTAGTCAAGAGTTGCCGATTCATTAATATCGGTAATGGCAAGAAAGGCGCAGGCATTGCAAACAATGCAGAAGATACCAAGAATGCTGATGAAGCCAGTTATGGTACTTACCTGAACAATTACTTCATTAACTGCTATGGCGGTTTTGGCTTCGGCACAGTTAACCCTGACTTCATTGCAGCTAAAGATCTCATTAAAGGGATTAAGGCAATTGGTAACGTATTTGAGAACACACTGCGTACTGTCATCGGTATTCGTGATCTCTATCAGCCAGTTCTGTTGGATAACGTCGTAACTACTCAAACTACGGGTAACGTTACTGCGGTTGAAATTACCAACTGTAGCAACTTCCAGTTTACTGGTCGCGTTACTGATGTAGCGGGTTCGGCACTGATCATTACTAACTCGAGCGGCTCTATTGATTTAGTAGCAGAGAATGTTTCTACTACTAAAACGCTCAATGGTGTTAATATCACAGACAGTAATCGAGTGACCGGTAAGATCCGTTTGATTAATGGCCAACGTCGTGGTGTTACTATCTCTAACTGCAATAACCTTGACTTAGACTTCTACATCGAATCCCCTGCTCAAGATGCATTCGAAGCAGTGAACTGTCGTTACTCTGATATGGATGTTAAGTTGGTTAATATTCCAGAACACGGCATGACCCTGAATGGACTCATTGAGAGTAACGTTAGCTTCAACATTAACGATGCTGGGGTCAAGACTGCTGGTACGTATTACCCAATCCGTTTACTGGGTGTTCGTAATAGTATTCTGACTGGCGTATCGTCCTCTACAGGTGCAGTGAAGCCACTTTACGACATCACTTCTGATGCCAACAACGCAAACGTTTTGATTACCAACAGTCGTCTGGCTGCAGGTAGTACGGGTAAAGTGCAAGTGGGCTCAGGCTCTACAATTACCCAGAATAATATCATCTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
40d8fb9eb1ee158f6c9bca8bfcc27d512710616e43c0327593d40a5ab34b240d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8233
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50