Protein

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Genbank accession
QSM00873.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MSYLGRPPSVPAGTRVVYEFVATEGQTVFSGEDEYGRILSYDPGYVNLFVNGRILSGLDFDALDGSRVTIKTGLPANTVVQVEAFGTFAIADVYSRLDVDSLLTGKVSNSLVKLIDFKKHNTSGLYVAFGDETAGLATPNAPVKSGNNRLTVLVSGDTQVTHYIVTMNSSGIHCMWSGIYYGETGGVSGSGTLKWNRELNDKDSPAGIPQPWPLTTAPSGWLICNGQSFSTANYPELAVAYPSGVLPDLRGEFLRGWDGGRNVDSGRVILSLQDQSLESHKHLFPVWTARLNDYPLTHPSLAGSTLLRQITPSSPQIDYDNYPYPFSTITEGGVVTGTTTPYGNAETRPRNVAFNYIVRAR
Physico‐chemical
properties
protein length:361 AA
molecular weight: 39091,26720 Da
isoelectric point:5,53699
aromaticity:0,10249
hydropathy:-0,19529

Domains

Domains [InterPro]
DC_0310
STR
85–361
DC_0310
SSF88874
STR
202–360
SSF88874
IPR037053
ATT
203–255
IPR037053
IPR051934
Unmapped
204–285
IPR051934
IPR011083
ATT
207–254
IPR011083
QSM00873.1
1 361
Architecture
STR
ATT
STR
STR 85-202 | ATT 203-255 | STR 256-361
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QSM00873.1
1 361
Domain Start End Length (AA) Confidence
N-terminal 1 254 254 0,6993
Central domain 255 350 97 0,0015
C-terminal 351 361 10 0,9865
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-254
Central
255-350
C-terminal
351-361

Taxonomy

  Name Taxonomy ID Lineage
Phage Yersinia phage YerA41
[NCBI] 		2815754 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Yersinia ruckeri
[NCBI] 		29486 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QSM00873.1 [NCBI]
Genbank nucleotide accession
MW570730.1 [NCBI]
CDS location
range 108160 -> 109245
strand -
CDS
ATGTCTTATTTAGGAAGACCACCTAGTGTTCCAGCAGGTACTCGTGTAGTATATGAGTTCGTAGCGACTGAAGGTCAAACTGTATTTTCTGGTGAAGATGAATATGGTAGAATCCTGAGTTATGATCCAGGTTATGTTAACTTATTCGTCAATGGTAGAATCCTGAGTGGACTTGACTTTGATGCATTAGATGGATCACGAGTAACCATTAAGACAGGATTACCTGCTAATACTGTAGTTCAGGTAGAAGCTTTTGGTACTTTTGCTATTGCTGATGTATACAGTAGGTTAGATGTTGATAGTTTATTAACTGGAAAAGTATCTAACTCTTTAGTAAAACTTATTGACTTTAAAAAACATAATACTTCTGGATTATATGTAGCTTTTGGTGATGAAACTGCTGGATTAGCTACTCCTAATGCTCCAGTTAAATCAGGTAATAATAGATTAACAGTATTAGTTAGTGGTGATACTCAAGTCACTCATTATATAGTTACCATGAACTCGTCAGGAATTCACTGTATGTGGAGTGGTATCTATTATGGAGAGACTGGTGGAGTATCAGGATCTGGTACATTGAAGTGGAATAGAGAATTAAATGATAAAGATTCTCCAGCAGGTATTCCTCAACCATGGCCACTGACTACTGCACCTTCTGGATGGTTAATATGTAATGGTCAATCATTCAGTACTGCTAACTATCCTGAATTAGCTGTAGCTTATCCATCAGGAGTTCTCCCTGACTTACGTGGTGAGTTCTTGAGAGGTTGGGATGGTGGAAGAAATGTAGATAGTGGTAGGGTTATATTGAGTCTTCAAGATCAGTCATTAGAATCTCATAAACATTTATTCCCAGTATGGACTGCTAGATTAAATGATTATCCTTTAACTCATCCATCGTTAGCAGGATCAACATTATTAAGGCAAATTACTCCATCATCACCACAAATAGATTATGATAATTATCCTTATCCATTCTCTACAATAACTGAAGGTGGGGTGGTGACTGGTACCACTACTCCTTATGGTAATGCTGAAACTAGACCACGAAACGTGGCATTTAACTATATAGTTAGAGCTAGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
899f8263384f8c6b7924dc94ccbf458930a4adc6fb32a64c68016eea4d13a626
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7128
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50