Protein

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Genbank accession
XPA09472.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MALPYPAIKKIPNTEPAAIPALWNDTYVQIDANFGSLATRLDTVEGTMVKSLGDLGITVAASKINFLSTVTSDVQAQLNGKFATPAGTTAQYVRGDGSLAAFPTTWAWGSISGKPTTFAASGMTLAASDVPTLNQNTTGSAATLATARTLTIGAAGKTFNGSANVAWTLAEIGAAAVGHQHVIGDVTGLQAALDAKATGEHNHTLDSLSNVTVANNSVGSLLSWNGTAWVNSSLAAAGVSAVGHTHAIGDVTGLQTALDGKLATSGTAAAATKLATARTLTLGATARSFDGSANLSWTLADLGAANVNHTHVISEVSGLQTALDGKASSAHNHTLDALSNVTVTNNAAGEILKWNGTTWVNNTLAEAGIAAVGHTHVVADVSGLQGALDGKLGTGANAVSATRLQTARTLTIGNTARGFDGTGNLSWSLGEIGAAGTGANWFSGVQNAPGFNTTSSRELKQGIENLTVADGLVDLFRPVSFQYKADPSRNVMGLILEEVREICPAACSEDGIDYGQLVPVLIVELQRMRGRVANLEGKAA
Physico‐chemical
properties
protein length:540 AA
molecular weight: 54976,74870 Da
isoelectric point:5,72178
aromaticity:0,05185
hydropathy:0,08407

Domains

Domains [InterPro]
DC_1141
STR
9–540
DC_1141
PF12789
STR
175–217
PF12789 PF12789 PF12789 PF12789 IPR030392
IPR030392
CHP
455–506
IPR030392
XPA09472.1
1 540
Architecture
STR
STR 9-540
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage vB_Xcc_GYRb1
[NCBI] 		3454946 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Xanthomonas campestris pv. campestris str. 8004
[NCBI] 		314565 Pseudomonadota > Gammaproteobacteria > Lysobacterales > Lysobacteraceae > Xanthomonas > Xanthomonas campestris

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XPA09472.1 [NCBI]
Genbank nucleotide accession
PQ569993.1 [NCBI]
CDS location
range 68205 -> 69827
strand +
CDS
ATGGCCCTTCCGTATCCCGCCATCAAGAAAATCCCGAATACCGAACCGGCGGCCATTCCTGCGCTCTGGAACGACACCTACGTCCAGATCGACGCGAACTTCGGCTCGCTCGCGACCCGCCTCGATACCGTCGAGGGGACGATGGTCAAGAGCTTGGGCGACCTCGGCATCACGGTCGCGGCAAGCAAGATCAACTTCCTGTCCACCGTCACCAGCGATGTGCAGGCGCAGCTCAACGGCAAGTTCGCCACGCCGGCTGGCACCACGGCGCAGTACGTGCGCGGCGACGGCTCGCTGGCGGCGTTCCCGACCACGTGGGCATGGGGTTCCATCTCCGGCAAGCCGACCACCTTCGCCGCGTCCGGCATGACGCTGGCAGCCAGCGACGTCCCCACGCTCAACCAGAACACGACCGGCTCGGCCGCGACGCTGGCCACCGCGCGCACGCTCACCATCGGCGCTGCGGGCAAGACCTTCAACGGCTCGGCGAACGTCGCGTGGACGCTGGCAGAAATCGGCGCTGCCGCCGTGGGCCACCAGCACGTCATCGGGGATGTGACCGGGCTGCAGGCCGCGCTCGATGCGAAGGCGACCGGTGAGCACAACCACACGCTGGACTCGCTCTCGAACGTCACAGTCGCCAACAACTCCGTTGGCTCGCTGCTGTCGTGGAACGGAACGGCGTGGGTGAACAGCTCGCTAGCCGCCGCCGGCGTCTCGGCCGTCGGCCACACGCACGCCATCGGCGACGTCACCGGCTTGCAGACGGCGCTGGACGGCAAGCTGGCTACCAGCGGCACGGCTGCTGCTGCGACAAAACTGGCCACGGCGCGCACGCTCACGCTCGGCGCGACCGCGCGCAGCTTCGACGGCAGCGCGAACCTGAGCTGGACGCTGGCGGACCTCGGCGCGGCAAACGTCAACCATACGCACGTCATCAGCGAGGTGTCGGGCCTGCAGACGGCGCTTGATGGCAAGGCCAGCTCGGCGCACAACCACACGCTCGATGCGCTGAGCAACGTCACCGTCACGAACAACGCGGCCGGCGAAATCCTCAAGTGGAACGGCACGACGTGGGTCAACAACACGCTGGCGGAGGCGGGTATCGCTGCCGTCGGGCACACGCACGTCGTCGCCGACGTGTCGGGCCTGCAGGGCGCGCTGGATGGCAAGCTGGGCACGGGCGCGAACGCCGTCTCCGCCACGAGGCTGCAGACCGCGCGCACGCTGACCATCGGCAACACCGCGCGCGGCTTCGACGGCACCGGCAACCTGAGCTGGTCCCTCGGCGAGATTGGCGCCGCCGGCACGGGAGCGAACTGGTTCAGCGGCGTCCAGAACGCGCCGGGCTTCAACACCACGTCCTCGCGCGAGTTGAAGCAGGGCATCGAGAACCTCACGGTGGCCGACGGCCTCGTGGACCTGTTCCGCCCAGTGAGCTTCCAGTACAAGGCCGACCCCTCGCGCAACGTGATGGGCCTGATCCTCGAAGAAGTGCGCGAAATCTGCCCGGCGGCCTGCAGCGAGGACGGCATCGACTACGGTCAACTCGTGCCGGTGCTCATCGTGGAGCTTCAGCGCATGCGCGGCCGCGTGGCTAACCTCGAAGGGAAGGCCGCCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7aea66cf646e8dc77b9f78f26e8f76bcfc88a0a645bd4bfbb87ab7357d696613
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7052
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50