Protein

View in Explore
Genbank accession
QBQ77300.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,72
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MPRLIFKNNFEVALAQPTTTSDTTITIRSGSDFPTLGANERVVATIVDAATGLQFEIVTVTAVVGNVLTVQRAQEGTAARAWAAGDLLSIRTTAATLTGTVRNFGEIPSGINLNALTGSWFGQYHQSANAGASAPLNYPVEQAGVLEVLQTGVATESCIQRYTTYSNNTLHQRRYTAASSAWSNWVRIYTDKDVIPVTNGGTGQTTIQGMKSAFGFGQVADQNIVPTSMGGTGSGDNAQAWLNIRPTGPTPLAGDPVNDYDAATKRWVQNLINTGTVGPNMNGVMNYGVGDFHLRDSRAYIQPYEVVADGQLLNRADWPELWAYAQMLTPIADADWLADPTKRGKYSLGNGTTTFRVPDRNGVQVGSLAALYGRGDGAGNGTANANADGVVFDSAAPNIIGNIGGVIQYGATGPFLYFQSEAPVQNYDMGSGIQRVSFDASRSSPVYGRSNSEIMGRNFVGVWVIRASGGFVAANTSWSVINADSSAPVAGALVVGGKVESKYSNPSSSQFARLYSSSSWGSSSYAVVEAEGSSKHAYKFYEDGTVDFRQSGKTNPFRMYTPLGTWNGITDAAVSNLTTNGMDRVAIASGSDTLVRGYSIGATKPNGYPTKVGYHMYLPGNAAFGIACVVIGGDNGKFCRYFFDIDGQIYGSTDYGNFSYTKNGTSDSRVKHGIAPVGVDKSYSNIKGLEFVEFIYDNDEQNRVRHGVIAQQAEGVEPLYVKTRKYVGSNPGEIVEQKELDTTPMLLDTMHVVQELMKKVESLEAEIAALKEAK
Physico‐chemical
properties
protein length:774 AA
molecular weight: 82735,07540 Da
isoelectric point:5,56513
aromaticity:0,09690
hydropathy:-0,23889

Domains

Domains [InterPro]
DC_1952
STR
1–317
DC_1952 IPR030392
cd19958
STR
105–189
cd19958 DC_1141
IPR030392
CHP
666–718
IPR030392 Coil
QBQ77300.1
1 774
Architecture
STR
STR 1-774
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QBQ77300.1
1 774
Domain Start End Length (AA) Confidence
N-terminal 1 524 524 0,4444
Central domain 525 723 200 0,1499
C-terminal 724 774 50 0,9838
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-524
Central
525-723
C-terminal
724-774

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoM_WFH
[NCBI] 		2508192 Uroviricota > Caudoviricetes > Lindbergviridae > Wifcevirus WFH >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBQ77300.1 [NCBI]
Genbank nucleotide accession
MK373776.1 [NCBI]
CDS location
range 5685 -> 8009
strand -
CDS
ATGCCAAGGCTAATATTCAAAAACAACTTTGAGGTCGCGCTGGCTCAACCAACGACAACTTCAGACACCACAATCACAATTCGCTCAGGGTCAGACTTTCCGACCTTGGGCGCAAACGAGCGTGTAGTGGCGACAATCGTCGACGCTGCAACAGGCCTACAATTTGAAATAGTCACAGTAACAGCCGTGGTTGGAAACGTCCTGACCGTGCAGCGTGCACAGGAAGGTACTGCAGCGCGTGCATGGGCGGCTGGTGATTTACTTTCCATTCGAACAACTGCTGCGACTTTGACGGGTACTGTCCGAAACTTTGGAGAGATTCCCTCAGGCATCAACCTTAATGCGTTGACTGGTTCATGGTTTGGTCAATATCACCAATCAGCAAATGCTGGCGCATCGGCACCCCTTAACTACCCTGTGGAACAAGCGGGAGTTCTTGAGGTGCTACAAACAGGCGTTGCCACAGAAAGTTGCATCCAAAGATATACAACTTATTCCAATAACACGCTGCACCAAAGAAGATACACCGCTGCATCATCGGCTTGGTCTAATTGGGTGCGAATATACACCGACAAAGATGTAATCCCAGTCACAAATGGTGGTACAGGCCAGACTACCATTCAGGGCATGAAATCTGCTTTTGGATTCGGACAAGTCGCTGATCAAAATATCGTTCCCACTTCCATGGGTGGCACAGGATCAGGGGATAATGCGCAGGCTTGGTTGAATATTCGACCGACAGGCCCAACTCCGCTTGCTGGTGACCCTGTGAATGATTATGATGCTGCGACTAAACGTTGGGTTCAAAACCTTATAAACACTGGCACCGTTGGACCGAACATGAACGGTGTAATGAACTATGGTGTTGGTGATTTTCACTTACGTGATAGTCGCGCATACATCCAGCCGTATGAAGTTGTGGCAGACGGGCAATTGCTTAACCGTGCAGACTGGCCTGAGCTTTGGGCTTATGCGCAGATGTTGACTCCTATTGCTGATGCTGACTGGCTTGCAGACCCTACAAAACGCGGAAAGTATTCACTTGGTAATGGTACAACGACTTTCCGCGTGCCTGACCGAAACGGCGTTCAAGTTGGTTCATTAGCCGCTCTCTATGGGCGAGGTGATGGTGCAGGGAATGGAACGGCAAACGCCAATGCTGATGGTGTTGTGTTTGATTCTGCTGCGCCTAACATCATCGGTAATATCGGTGGCGTCATTCAGTACGGTGCTACTGGTCCTTTCCTGTATTTCCAGTCAGAGGCTCCTGTACAGAACTACGACATGGGGTCTGGTATTCAACGTGTAAGCTTTGACGCCAGTCGATCAAGCCCAGTTTATGGCCGTTCAAACAGTGAAATCATGGGCCGTAACTTCGTTGGCGTTTGGGTGATTCGTGCATCGGGTGGATTTGTTGCTGCGAATACGTCTTGGAGCGTAATCAATGCAGACTCAAGCGCACCAGTGGCAGGCGCACTGGTTGTCGGCGGCAAAGTAGAGTCAAAATATAGCAATCCTAGTTCATCACAGTTTGCACGCCTGTACTCAAGTTCTTCATGGGGTTCTTCTAGTTATGCAGTCGTAGAGGCGGAGGGTTCTTCCAAGCACGCTTATAAATTCTATGAAGATGGCACCGTTGACTTTCGACAGTCAGGGAAGACCAACCCATTCCGCATGTATACGCCTTTAGGCACATGGAATGGAATAACGGATGCCGCTGTATCTAACTTGACCACTAACGGAATGGACAGAGTGGCCATCGCGAGTGGATCAGATACTCTGGTGCGCGGCTATTCTATCGGTGCCACCAAACCTAATGGATACCCAACCAAGGTTGGATACCATATGTATTTACCAGGTAATGCTGCATTCGGCATAGCTTGTGTGGTAATCGGTGGAGATAACGGAAAATTTTGCCGTTACTTTTTTGACATTGATGGTCAAATATATGGTTCAACCGATTACGGTAACTTCAGTTATACAAAAAATGGCACTTCTGACTCACGTGTAAAACATGGCATCGCCCCTGTTGGAGTTGACAAATCATACTCTAATATTAAAGGACTGGAATTTGTAGAGTTCATTTATGACAATGACGAACAAAATCGAGTTCGGCACGGCGTGATTGCACAGCAAGCAGAGGGTGTTGAGCCTTTATATGTTAAGACGCGCAAATATGTTGGGAGCAATCCAGGAGAAATTGTTGAACAAAAAGAACTTGACACAACACCTATGCTTTTGGATACGATGCACGTGGTGCAGGAGTTGATGAAGAAGGTCGAGTCACTAGAGGCAGAGATAGCCGCGCTAAAGGAAGCGAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
694cbd0fc5193e0d4f4ec0c6d0ba02efa5fdd0681c1303a244b9865795dfb790
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7227
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Still something new to discover - new insights into E. coli phage diversity and taxonomy Korf,I.H.E., Adriaennsens,E., Dreiseikelmann,B., Kropinski,A., Nimtz,M., Meier-Kolthoff,J.P., Rohde,M., van Raaij,M. and Wittmann,J. 2019-05-17 — GenBank