Protein

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Genbank accession

YP_010068895.1 [GenBank]

Protein name

long tail fiber protein distal subunit

RBP type

Evidence UniProt/TrEMBL

Probability 1,00

Evidence GenBank

Probability 1,00

TSP

Evidence DepoScope

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,65

Evidence RBPdetect2

Probability 0,96

Protein sequence

MATLKQIQFKRSKVAGVNPTAAQLAEGELAINLKDRTLFTKDDLGNIISLGFAKGGDINGNVTQNGDYLQNGTFNLNGNMFVYAGKYIEFLPKTAGNGAWANQHLNKAPIFTDLSSTTSVSEYHPLIKQRYKDGTFSAGTLVNEGSFKFHYIDETGTSKYWTFNRNGNFQVDSGSLLVSNGYLVTQSNIETKAGSLIGPKVITKNINVSTKSWDTNIDTAYDLVSLPTWQYTPTETDLDTNGINYLRKFRGHVSSAIFHEVADARSGKPQNISYWTGRNAEVYQWSYTTDGRMSVANSIGIGLADVGDQGRYPLVSFGKGIAIGDNDTGIKWVRDGVIDLVANGISAGTINSNGINSTKKLMVGYSRDSGTTWDFPNSNQAMFTARTDVDGNNNGDGQTHIGYSSNAKMYHYFRGQGRMSVSMGDGLLIEPGILDIKTGSNSLNLRADGTIASVQTLKLNNGLYFNGDGTNASLVFKAASGIDGTKQIVWEGGTRSGQNKSYVTVKAWGTANNTSGDKSRETVFEVADGQGYYFYAQRTAPAAGSTVGPIQFRIAGALLASGGITASGSIATESSLVANSGLSVNGQAKFGGTADALRIWNAEYGAIFRRSEAALHIIPTPKDAGRFGGISNLRPLSIGLNNGMVQMRHSVTLGDDGRGGNMITVDNDSKIVVVTSHSRISPNYRMQLGQAAYIEAECTDTVRPAGAGSFASQNYADVRAPIYMNIERTATSEYIPIVKQRYVNGDSTYSIGTLISQGDFRVHYHQGNSTTGTDLSWEFRRTGDFRVPGKIIAGAATLGTDGNITGGSGNFANLNTTLDRKVNTGGWQGGATAGWYKFATVTIPQAVGTASFKIIGGNGFNANSPEQATITEIVLRTGNNNPKGINATMWARTSNGFANIATMNTSGDTYDVYVYVGTFSNSLIVEYECSSNSAVTVVGINEGPQTPVAELPAGHLVGQVYMMYSDAQIPYPVGAPIPWPSDSVPAGFALMEGQTFDKSAYPKLAIAYPTGTIPDMRGQTIKGKPSGRAVLSAEADGVKAHSHSASASSTDLGTKTTSSFDYGTKTTSSFDYGTKTSNNTGAHTHSLSGSTNTAGAHSHTSALYAGSNNSPGTGSIRGSAGGGNTLGTSSSSGAHSHSISGTAASAGAHAHTVGIGAHTHTVGIGAHTHSVAIGSHGHTITVNSTGNTENTVKNIAFNYIVRLA

Physico‐chemical properties

protein length:	1204 AA
molecular weight:	127049,05270 Da
isoelectric point:	8,45762
aromaticity:	0,08638
hydropathy:	-0,30706

Domains

Domains [InterPro]

DC_0538
STR
1–825

DC_0538 IPR051934

DC_2005
STR
794–1094

DC_2005 DC_0163

SSF88874
STR
966–1111

SSF88874 IPR005003 IPR005003

IPR037053
ATT
970–1022

IPR037053 IPR005003 IPR005003 IPR005003 SSF88874

IPR011083
ATT
974–1021

IPR011083

YP_010068895.1

1 1204

Architecture

STR

ATT

STR

STR 1-969 | ATT 970-1022 | STR 1023-1204

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_0538	STR	DC_0538	1	825	Novel HMM	DC_0538	Central	Low	Positional only	380 proteins / 380 hits
DC_2005	STR	DC_2005	794	1094	Novel HMM	DC_2005	Central	Low	Positional only	76 proteins / 76 hits
IPR051934	Unmapped	-	884	1204	InterPro	Bacteriophage Tail Fiber Structural Protein	-	-	-	-
SSF88874	STR	SSF88874	966	1111	Merged direct domain	SSF88874	Central	Low	Positional only	109 proteins / 109 hits
IPR037053	ATT	IPR037053	970	1022	Merged direct domain	Phage tail collar domain superfamily	N-terminal	Low	Positional only	37 proteins / 37 hits
IPR011083	ATT	DC_0235	974	1021	InterPro cluster	Phage tail collar domain	C-terminal	Medium	Text match	1051 proteins / 1051 hits
IPR005003	Unmapped	-	1036	1049	InterPro	Bacteriophage lambda, Tail fiber protein, repeat-1	-	-	-	-
IPR005003	Unmapped	-	1078	1091	InterPro	Bacteriophage lambda, Tail fiber protein, repeat-1	-	-	-	-
IPR005003	Unmapped	-	1092	1102	InterPro	Bacteriophage lambda, Tail fiber protein, repeat-1	-	-	-	-
DC_0163	STR	DC_0163	1104	1204	Novel HMM	DC_0163	Central	Low	Positional only	47 proteins / 47 hits
SSF88874	STR	SSF88874	1105	1203	Merged direct domain	SSF88874	Central	Low	Positional only	109 proteins / 109 hits
IPR005003	Unmapped	-	1130	1143	InterPro	Bacteriophage lambda, Tail fiber protein, repeat-1	-	-	-	-
IPR005003	Unmapped	-	1154	1165	InterPro	Bacteriophage lambda, Tail fiber protein, repeat-1	-	-	-	-

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout

N-terminal

Central

C-terminal

YP_010068895.1

1 1204

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	266	266	0,1475
Central domain	267	465	200	0,5037
C-terminal	466	1204	738	0,8299

Note: Constraints were applied during segmentation.
Fixed 139 C-terminal predictions appearing before Central domain

Legend: N-terminal Central domain C-terminal

3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring

N-terminal
1-266

Central
267-465

C-terminal
466-1204

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Escherichia phage F2 [NCBI]	2696339	Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Mosigvirus
Host	Escherichia coli [NCBI]	562	cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Genbank protein accession

YP_010068895.1 [NCBI]

Genbank nucleotide accession

NC_054913 [NCBI]

CDS location

range 70836 -> 74450
strand -

CDS

ATGGCTACATTAAAACAGATACAATTTAAAAGAAGCAAAGTGGCAGGAGTTAATCCTACTGCAGCACAATTAGCCGAAGGCGAATTAGCGATAAACTTAAAAGATCGAACTCTTTTTACTAAAGATGACCTCGGTAATATTATTAGCCTAGGCTTTGCTAAGGGCGGGGATATTAACGGTAATGTAACTCAAAATGGTGATTATTTACAAAACGGCACATTTAACCTCAATGGTAATATGTTCGTTTACGCCGGTAAGTATATTGAATTTTTACCTAAAACCGCTGGAAATGGTGCTTGGGCCAACCAACATTTGAATAAAGCCCCTATCTTTACAGATTTAAGTTCAACTACTTCTGTTTCAGAATACCATCCGCTGATTAAACAACGCTATAAAGATGGAACTTTTTCTGCTGGTACATTAGTAAACGAAGGTAGTTTTAAATTCCATTATATTGATGAAACCGGGACTTCAAAATACTGGACTTTTAATCGAAACGGTAATTTTCAAGTTGATTCCGGAAGTTTATTAGTATCTAATGGATATTTAGTTACTCAAAGTAATATTGAAACTAAAGCTGGTTCTTTAATTGGTCCTAAAGTTATTACCAAAAATATCAATGTGAGCACTAAATCTTGGGACACTAATATTGATACTGCATATGATTTAGTTTCATTACCTACTTGGCAGTATACTCCAACCGAAACGGATTTGGATACTAATGGTATAAACTACCTTCGTAAATTCCGCGGACATGTTTCTTCTGCTATTTTCCATGAAGTTGCTGATGCTCGTTCAGGTAAACCACAGAATATTTCGTATTGGACGGGACGTAATGCTGAAGTTTATCAATGGTCTTATACCACAGATGGGCGTATGTCTGTTGCTAATTCGATAGGTATAGGTCTTGCTGATGTTGGTGACCAAGGACGTTATCCATTGGTTTCGTTTGGTAAAGGTATTGCAATTGGTGACAATGATACTGGTATTAAATGGGTTCGTGACGGGGTTATCGATTTAGTTGCGAATGGTATTTCTGCGGGTACAATAAACAGCAATGGTATTAACAGTACTAAAAAATTGATGGTCGGTTATAGCCGTGATTCTGGTACTACATGGGATTTTCCTAATAGCAATCAGGCAATGTTTACTGCGCGTACTGATGTTGATGGTAATAATAACGGTGATGGTCAGACTCATATCGGTTATAGTTCTAACGCTAAAATGTATCACTATTTCCGTGGCCAAGGACGCATGTCTGTTAGTATGGGCGATGGTCTTCTTATTGAGCCTGGTATTTTAGATATTAAAACTGGTTCAAATTCATTAAATTTACGTGCCGATGGCACTATTGCTTCTGTTCAAACATTAAAGCTTAATAATGGATTATATTTTAATGGTGATGGAACCAACGCTTCTCTAGTTTTTAAAGCAGCTTCAGGTATTGACGGCACTAAGCAAATCGTGTGGGAAGGTGGTACTCGTTCAGGTCAGAATAAGAGTTATGTAACTGTTAAAGCATGGGGCACTGCTAATAATACGTCTGGTGATAAATCTCGTGAAACTGTGTTTGAAGTTGCTGACGGCCAAGGTTATTATTTTTATGCACAACGTACGGCTCCTGCAGCAGGTTCAACTGTAGGACCAATTCAATTTAGAATTGCTGGAGCATTATTAGCTTCCGGTGGTATTACTGCTTCCGGCTCTATTGCTACTGAATCAAGTTTAGTTGCTAATAGCGGATTATCTGTAAACGGTCAAGCTAAATTCGGTGGAACAGCTGATGCATTAAGAATTTGGAATGCTGAATACGGTGCTATTTTCCGTCGTTCAGAAGCCGCATTGCATATTATTCCGACTCCTAAAGATGCCGGGCGGTTCGGTGGAATAAGTAATCTTCGCCCATTAAGTATCGGCCTTAATAATGGTATGGTTCAAATGCGCCATTCTGTCACGTTAGGCGATGATGGCAGAGGTGGCAATATGATTACCGTGGACAATGACAGCAAAATTGTTGTTGTTACTAGTCATAGCCGCATTTCTCCTAATTACCGTATGCAATTAGGTCAGGCTGCATATATTGAGGCCGAATGTACTGATACGGTACGCCCAGCAGGAGCTGGTTCGTTTGCATCTCAGAATTACGCAGATGTCAGGGCTCCAATTTATATGAATATAGAGCGTACTGCTACTTCTGAATACATTCCTATTGTTAAACAACGGTATGTAAATGGTGATAGCACTTATTCTATTGGCACCTTAATTTCTCAAGGAGACTTCCGCGTCCATTATCACCAGGGCAATAGTACTACCGGAACTGATTTAAGTTGGGAATTCCGTCGTACCGGTGACTTCCGCGTACCTGGTAAAATTATTGCAGGTGCCGCAACTTTAGGAACTGACGGTAATATCACCGGTGGCTCTGGTAACTTTGCTAACTTAAACACTACTTTAGACCGTAAAGTTAATACTGGCGGCTGGCAGGGTGGAGCAACCGCCGGATGGTATAAATTTGCAACAGTAACTATTCCACAAGCTGTAGGAACAGCAAGCTTTAAAATAATTGGCGGTAATGGATTTAATGCTAATTCACCGGAACAAGCCACTATTACCGAAATAGTTCTTCGTACTGGCAACAATAATCCTAAAGGTATTAACGCCACTATGTGGGCTAGAACCAGCAATGGTTTCGCCAATATTGCTACAATGAATACTTCAGGTGACACCTACGATGTTTATGTATATGTTGGAACGTTCTCAAACTCGTTAATAGTTGAATATGAATGTTCGTCTAACTCTGCCGTGACAGTTGTTGGAATTAACGAAGGCCCCCAAACCCCAGTCGCAGAATTACCCGCTGGTCACCTTGTTGGTCAAGTGTATATGATGTATTCTGATGCTCAAATACCTTATCCAGTCGGTGCTCCGATTCCGTGGCCAAGTGATTCAGTTCCTGCTGGATTTGCTTTAATGGAAGGTCAGACTTTTGATAAGTCTGCATATCCTAAGCTCGCTATCGCATATCCTACAGGTACTATTCCTGATATGCGTGGACAAACTATCAAGGGTAAACCAAGTGGTCGTGCTGTTTTGAGCGCTGAGGCAGATGGTGTTAAGGCTCATAGTCATAGTGCAAGTGCATCAAGCACAGATTTAGGTACTAAAACCACATCAAGCTTTGACTATGGTACTAAGACGACAAGTAGTTTCGACTATGGTACTAAGACCAGTAATAATACTGGTGCTCATACGCATAGTTTGAGCGGTTCCACAAACACCGCCGGTGCGCACAGCCACACAAGCGCTCTTTATGCGGGAAGTAACAACTCTCCTGGTACTGGTTCTATAAGAGGATCCGCCGGTGGTGGTAATACGCTTGGAACTTCTTCTTCTTCTGGGGCACATTCGCACTCTATATCTGGTACTGCTGCAAGCGCAGGCGCTCACGCACATACTGTTGGTATTGGTGCTCATACCCATACAGTTGGTATTGGTGCTCACACCCATTCAGTAGCAATTGGTTCACATGGACATACAATAACTGTAAATAGTACAGGTAATACAGAAAACACGGTTAAAAACATTGCTTTTAACTATATCGTTCGTTTAGCATAA

Genome Context

Tertiary structure

PDB ID

e9b068c6ee8c39a92730568e86be7cad99f0b63808fe5cbe9994a9f4e49e2e87

ESMFold

Source ESMFold

Method ESMFold

Resolution 0,4862

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

3D Structure with Domain Coloring

Domain Coloring

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence