Protein

View in Explore
Genbank accession
XRA11087.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,82
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MVKNMITGSKGGSSKPHTPVEMEDNLISINRIRILLAVSDGEVDPDFSLKDLYFDDVPVMNQDGSLNFQNVKAEFRPGSQTQDYIQGFTDTASEITVARDLTAATPYIISVTNKNLSAIRIKILMPRGFTQEDNGDLTGVRVEYAVDMAIDGAEYNEVLHDVIEGKTMSGYDRSRRIDLPAFNERVLLRVRRLTDSTSARVTDLIKMQSYAEVVDAKFRYPMTGLVYVEFDSELFPNALPNISIKKKWKIINVPSNYDPISRTYSGSWDGTWKKAWSNNPAFVLYDLITNQRYGLDQRELGIALDKWSIYECAQYCDQMVPDGKGGTEPRYLCDVVIQSQVEAYQLVRDICSIFRGMSFWNGESLSIVIDKPRDPSYIFTNDNVVNGEFTYTFASEKSMYTQCNVTFDDEQNMYQQDVEGVFETEAALRFGYNSTSITAIGCTRRSEANRRGRWILKTNVKSTTVNFATGLEGMIPTVGDVIVVSDNFWSSALTLNLSGRLMEVSGLQVFTPFKVDARAGDRILVNKPDGKPVGRTIARVSDDGKTLTLNTTFGFDVHPDTIFAIERTDIAQQRYVVTGITKGDGDEEFTYNITAVEYDPNKYDEIDYGVNIDDRPTSIVQPDVLPAPENVKIESYSRVVQGASVETMHVSWDKVEYASLYEMQWRKDNGNWNNTPRTANKETEVEGIYAGNYHVRVRSVASNGSASGWSKIVSAELTGKVGEPEKPINLTASDDEVFGIRVKWGMPEGSGDTAYIELHQAPNGADGHPLVDQATLLTLVPFPQYEYWHSILPAGHVVWYKARSVDKIGNVSDWTDFVRGMASTDTSIITDHIKVDIENSEGYKWLEENAIKSNDKIHSAAESIIQNALANDTDVRRMRVENGKRKAEFLQSLKLIADETEARVTAITQLNAQFDEKLTAQNSELREVIANSTETLSQQINQLTATFEGEINGVKQDVTAKITEVNKAITNEAEARASADQALSTQIGDTQSAVNQKLDSWVNADSIGAMYGVKLGLRYNGQEYSAGMALSLVGDGSGVKSQFLFDAGRFAIINNQQSGGFTLPFVVENNQVFINSLLVKNGSIGNAQIADQINSNNWSSGAAGWAINKGGYAEFNQVTVRGNVYASDGIFNGVIYARGGHFTGTVEAESFVGDVVNAGVGIDKEQLGSGGLSSTVVYTDSSGSARPKTAIFSAVCHMRGARSDRDTTVGVKVTINGVSRDFGGMFIPPSQEVFVPIHYAVQNITTQQVTATIELYNYGGLEGATQKKIIAPTLQIARGSGSFTSY
Physico‐chemical
properties
protein length:1286 AA
molecular weight: 141780,73110 Da
isoelectric point:4,92626
aromaticity:0,09020
hydropathy:-0,32558

Domains

Domains [InterPro]
DC_0014
STR
1–1280
DC_0014
IPR053171
Unmapped
3–876
IPR053171 IPR015406
IPR055385
ATT
92–216
IPR055385 IPR032876 IPR036116
IPR013783
STR
626–719
IPR013783
XRA11087.1
1 1286
Architecture
STR
ATT
STR
ATT
STR
STR 1-91 | ATT 92-216 | STR 217-338 | ATT 339-487 | STR 488-1280 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XRA11087.1
1 1286
Domain Start End Length (AA) Confidence
N-terminal 1 486 486 0,8709
Central domain 487 1025 540 0,0923
C-terminal 1026 1286 260 0,5525
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-486
Central
487-1025
C-terminal
1026-1286

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_GS166
[NCBI] 		3403488 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica subsp. enterica serovar Infantis
[NCBI] 		595 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Salmonella > Salmonella enterica

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XRA11087.1 [NCBI]
Genbank nucleotide accession
PV090993.1 [NCBI]
CDS location
range 23621 -> 27481
strand +
CDS
ATGGTTAAAAATATGATAACTGGCAGTAAGGGCGGTTCATCCAAACCGCATACACCTGTTGAAATGGAAGATAACTTGATTTCAATTAACAGGATCAGAATTCTTTTAGCTGTTTCTGATGGTGAAGTTGATCCAGACTTTTCATTGAAAGATTTATATTTTGATGACGTTCCGGTTATGAATCAGGACGGGTCACTAAACTTTCAGAATGTTAAAGCTGAATTCAGACCAGGCTCACAAACGCAAGATTATATTCAGGGATTCACTGACACGGCAAGTGAGATTACTGTTGCTCGCGATCTTACGGCTGCAACTCCTTATATTATTTCCGTGACTAATAAAAACCTTTCCGCGATCCGTATTAAAATTTTAATGCCGCGAGGGTTTACACAGGAGGATAACGGAGATTTAACAGGCGTTCGCGTTGAATACGCCGTTGATATGGCTATTGATGGTGCTGAATATAACGAGGTTTTGCATGATGTGATCGAAGGTAAAACAATGAGCGGTTACGACAGAAGCCGCCGAATTGATTTACCCGCATTCAATGAGCGTGTTTTATTGCGTGTTCGTCGCCTGACAGATAGCACGTCAGCAAGGGTTACGGATTTGATTAAGATGCAGAGCTACGCAGAAGTAGTAGACGCTAAGTTTCGTTATCCCATGACTGGTTTAGTTTACGTTGAGTTTGACAGTGAATTATTCCCTAATGCTTTGCCGAATATCAGCATTAAAAAGAAATGGAAAATCATTAATGTTCCGTCTAATTACGATCCGATTAGCCGCACATATTCAGGCTCTTGGGATGGAACTTGGAAAAAGGCATGGAGCAATAACCCTGCTTTTGTTCTGTATGATTTAATCACCAATCAGCGTTACGGACTCGACCAACGCGAATTAGGCATTGCGCTTGATAAGTGGAGTATTTACGAATGTGCGCAATATTGCGATCAGATGGTTCCAGATGGCAAGGGTGGAACAGAGCCGCGCTATCTATGCGACGTTGTGATCCAGAGTCAAGTAGAGGCTTATCAGCTTGTTCGTGATATTTGCTCAATCTTCCGAGGAATGAGTTTTTGGAATGGTGAGAGCCTTTCAATCGTAATCGACAAGCCGCGCGATCCGTCATACATCTTTACTAATGACAACGTGGTTAATGGTGAATTTACTTACACGTTTGCCAGCGAAAAGAGCATGTATACACAATGCAACGTGACTTTCGACGACGAACAAAACATGTATCAACAGGACGTTGAAGGAGTTTTTGAAACAGAGGCTGCGTTACGTTTTGGATATAACAGCACGTCAATAACTGCCATTGGATGCACCCGACGCAGTGAGGCTAATCGCCGTGGTCGCTGGATTCTAAAAACCAACGTTAAGAGCACAACAGTAAACTTTGCTACTGGCCTGGAAGGTATGATCCCAACGGTAGGCGATGTAATTGTTGTTTCGGATAACTTCTGGTCAAGCGCCTTAACGCTGAATCTATCAGGTCGCTTGATGGAGGTTAGCGGGTTGCAGGTGTTCACGCCGTTTAAGGTAGACGCAAGAGCAGGTGATCGCATTCTGGTAAATAAGCCGGATGGTAAGCCAGTTGGTAGAACCATTGCGCGTGTGAGCGATGACGGCAAAACGCTAACGCTAAACACAACGTTTGGCTTTGACGTTCATCCTGACACCATTTTTGCAATCGAAAGAACGGATATTGCACAGCAACGCTATGTTGTAACCGGAATCACTAAAGGTGATGGTGATGAAGAATTTACCTACAACATAACGGCTGTTGAATACGATCCGAATAAATACGATGAAATTGATTATGGTGTAAACATTGATGACCGTCCGACTTCAATCGTGCAGCCTGACGTATTGCCAGCACCTGAAAACGTCAAGATCGAATCTTATTCGCGAGTTGTTCAGGGCGCGAGCGTGGAAACAATGCACGTTTCATGGGATAAAGTTGAATACGCAAGTCTGTATGAAATGCAGTGGCGAAAAGACAATGGCAACTGGAACAATACGCCGCGAACCGCGAACAAGGAAACGGAAGTTGAAGGTATTTATGCGGGTAACTATCACGTCAGGGTTAGATCTGTTGCATCAAATGGTTCTGCTTCAGGATGGTCTAAGATCGTAAGTGCAGAATTAACAGGTAAAGTTGGGGAACCTGAAAAGCCTATTAATTTGACGGCTTCCGATGATGAGGTATTTGGTATTCGCGTGAAATGGGGTATGCCGGAAGGAAGCGGAGATACTGCTTACATAGAGTTACACCAGGCGCCAAATGGTGCTGATGGTCATCCACTTGTTGATCAAGCTACGCTATTAACGCTTGTTCCATTCCCTCAATATGAATACTGGCATTCAATACTGCCAGCTGGTCATGTTGTATGGTACAAGGCAAGGTCAGTAGATAAAATCGGTAACGTGTCTGATTGGACTGATTTTGTACGAGGAATGGCATCAACTGACACAAGCATTATTACAGATCACATTAAGGTTGATATTGAAAATTCGGAGGGATACAAATGGCTTGAAGAGAACGCTATTAAATCAAACGATAAGATCCACAGTGCAGCAGAATCAATCATTCAGAATGCGTTAGCGAATGATACTGATGTTAGACGTATGCGAGTAGAGAACGGCAAGCGCAAAGCTGAATTCTTGCAGTCTCTAAAACTGATTGCAGATGAAACGGAAGCGCGAGTAACCGCAATCACTCAATTAAATGCACAATTTGACGAGAAATTAACGGCTCAAAATAGCGAATTGAGAGAGGTAATTGCTAACAGCACAGAAACCCTTAGCCAGCAGATTAATCAGCTTACAGCTACGTTTGAGGGTGAGATTAACGGCGTTAAGCAGGATGTAACGGCAAAAATCACGGAAGTTAATAAAGCAATCACCAATGAAGCTGAGGCGAGAGCTTCAGCAGATCAGGCGTTATCAACTCAGATTGGTGATACCCAATCAGCAGTGAATCAGAAACTTGATTCATGGGTTAACGCTGATAGCATAGGCGCGATGTATGGCGTTAAGCTTGGGTTGCGTTACAACGGCCAGGAGTATAGCGCTGGAATGGCTCTTTCACTTGTGGGTGACGGATCTGGAGTTAAATCGCAATTCCTGTTTGATGCTGGAAGGTTTGCTATCATTAACAACCAACAAAGCGGAGGTTTTACACTGCCGTTTGTAGTTGAGAATAACCAGGTGTTTATCAATAGCTTGCTTGTGAAAAACGGCTCTATTGGCAATGCTCAGATTGCGGATCAGATTAACTCTAACAACTGGAGCAGCGGCGCGGCAGGTTGGGCCATTAACAAAGGAGGTTACGCTGAATTCAACCAGGTAACTGTAAGGGGCAACGTTTACGCAAGCGATGGTATTTTTAATGGAGTTATCTATGCTCGCGGAGGTCATTTTACAGGAACGGTTGAAGCAGAAAGTTTCGTTGGTGACGTGGTTAATGCTGGTGTTGGTATTGACAAGGAACAGCTTGGTTCTGGTGGGCTATCATCAACTGTTGTCTACACTGATAGTTCTGGATCTGCAAGACCTAAGACTGCAATATTTTCAGCGGTTTGTCATATGAGAGGTGCACGAAGCGATAGGGATACAACTGTTGGTGTGAAAGTAACAATAAATGGAGTTTCTAGAGATTTTGGTGGTATGTTCATACCTCCTTCACAAGAGGTTTTCGTACCAATTCACTATGCAGTGCAGAATATTACCACTCAGCAAGTAACGGCAACAATTGAGCTTTATAACTACGGAGGACTTGAAGGAGCGACACAGAAGAAAATAATCGCGCCAACATTGCAAATTGCAAGGGGTTCAGGATCATTTACATCGTACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
fc8e337bcddb582703b4da8875c4a1b84713aab3883fec423ca073c50e2d52b1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7624
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of lytic bacteriophages against Salmonella Infantis isolated from poultry farms in Ecuador Castillo-Beckmann,I., Gomez-Cano,I.S., Debut,A., Ballaz,S., Sevilla-Navarro,S. and Fernandez-Moreira,E. 2025-09-22 — GenBank